RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 MMABQ96EY8 250 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 PEX11GQ96HA9 241 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF681Q96N22 645 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 CHID1Q9BWS9 393 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 NPLQ9BXD5 320 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 TAS2R9Q9NYW1 312 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 MAGEL2Q9UJ55 1249 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 JRKO75564 520 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 CDC123O75794 336 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 MT-ND1P03886 318 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 GP1BAP07359 652 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 NCBP2P52298 156 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 RAB38P57729 211 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ADARB1P78563 741 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 FAM53BQ14153 422 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ERV3-1Q14264 604 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 C1orf189Q5VU69 101 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 CLVS1Q8IUQ0 354 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 OFCC1Q8IZS5 231 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 VPS37AQ8NEZ2 397 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ZFP90Q8TF47 636 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 PMEPA1Q969W9 287 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 PHOX2BQ99453 314 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 SEPHS2Q99611 448 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ANKRA2Q9H9E1 313 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ENAMQ9NRM1 1142 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 GPATCH2Q9NW75 528 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 NDOR1Q9UHB4 597 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 MYO1GB0I1T2 1018 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 TGFBR3LH3BV60 316 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 SNAP29O95721 258 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 NTRK1P04629 796 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 GZMMP51124 257 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 MVDP53602 400 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 MANFP55145 182 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 ZFP36L1Q07352 338 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 COX20Q5RI15 118 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 GLYATQ6IB77 296 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 TBPL2Q6SJ96 375 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 VPS50Q96JG6 964 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 RNF145Q96MT1 663 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 DPH2Q9BQC3 489 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 SLC35A5Q9BS91 424 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 BDH2Q9BUT1 245 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 KAT8Q9H7Z6 458 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 TPT1P8Q9HAU6 139 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 VPS4AQ9UN37 437 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 CLCA2Q9UQC9 943 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 SNX8Q9Y5X2 465 aa16.29■□□□□ 0.2
PPFIA3-207ENST00000602716 CLIC1O00299 241 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 ALAS2P22557 587 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 TMEM151BQ8IW70 566 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 CCDC116Q8IYX3 515 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 GPR135Q8IZ08 494 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 SLC38A9Q8NBW4 561 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 OR9A2Q8NGT5 310 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 DNAJB8Q8NHS0 232 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 OR5P2Q8WZ92 322 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 CTRCQ99895 268 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 YTHDF1Q9BYJ9 559 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 NTN4Q9HB63 628 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 ENTPD4Q9Y227 616 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 HEMK1Q9Y5R4 338 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 V9GYQ6 96 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 PMS2P1A4D2B8 440 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 H0YAE9 185 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 NUDT7P0C024 238 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 NTSP30990 170 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 SOX18P35713 384 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 FOXL2P58012 376 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 RPS26P62854 115 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 CALHM3Q86XJ0 350 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 C12orf43Q96C57 262 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 ZBED6CLQ96FA7 236 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 PRRX2Q99811 253 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 DPYSL5Q9BPU6 564 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 SOX17Q9H6I2 414 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 FANCEQ9HB96 536 aa16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 ACSS1Q9NUB1 689 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-207ENST00000602716 EFCAB7A8K855 629 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 UPK1AO00322 258 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 NME6O75414 186 aaPredicted RBP16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 PRSS23O95084 383 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 CCL4P13236 92 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 EFNA3P52797 238 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 NUP107P57740 925 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 CEBPEQ15744 281 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 PWWP2BQ6NUJ5 590 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 BMPERQ8N8U9 685 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 SIMC1Q8NDZ2 872 aa16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 ANKRD9Q96BM1 317 aaPredicted RBP16.27■□□□□ 0.2
PPFIA3-207ENST00000602716 CHST8Q9H2A9 424 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms