RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	CAPN3	P20807	821 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ECHS1	P30084	290 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ZFP36L2	P47974	494 aa	Known RBP	19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	FUT7	Q11130	342 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	RPS6KA2	Q15349	733 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	NNAT	Q16517	81 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	C6orf163	Q5TEZ5	329 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	LETMD1	Q6P1Q0	360 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	COMMD6	Q7Z4G1	85 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	DMRTC2	Q8IXT2	367 aa	Predicted RBP	19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	METTL4	Q8N3J2	472 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF615	Q8N8J6	731 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF483	Q8TF39	744 aa	Predicted RBP	19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	SELENOM	Q8WWX9	145 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF597	Q96LX8	424 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	HBEGF	Q99075	208 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	MRPL46	Q9H2W6	279 aa	Known RBP	19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	B4GALT7	Q9UBV7	327 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	ADAM29	Q9UKF5	820 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648	NPFFR2	Q9Y5X5	522 aa		19.8	■□□□□ 0.76
FARP1-231	ENST00000600648		A8MT66	165 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	CAPN14	A8MX76	684 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	FOXO6	A8MYZ6	492 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	TP53I11	O14683	189 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	ERAL1	O75616	437 aa	Known RBP	19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	TRAPPC6A	O75865	159 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	PDYN	P01213	254 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	POR	P16435	677 aa	Predicted RBP	19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	FEN1	P39748	380 aa	Known RBP	19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	GGTA1P	Q4G0N0	100 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	TMEM198	Q66K66	360 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	FAM111B	Q6SJ93	734 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	NEIL3	Q8TAT5	605 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	TRPC4AP	Q8TEL6	797 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	TP53INP1	Q96A56	240 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	RILP	Q96NA2	401 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648	BRINP2	Q9C0B6	783 aa		19.79	■□□□□ 0.76
FARP1-231	ENST00000600648		A0A087WUV0	522 aa	Predicted RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	C15orf38-AP3S2	A0A0A6YYH1	394 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	TRIM3	O75382	744 aa	Predicted RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	OTC	P00480	354 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	HOXD4	P09016	255 aa	Predicted RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	SBK3	P0C264	359 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	CNTF	P26441	200 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	DEK	P35659	375 aa	Known RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	NRG3	P56975	720 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	MYBPH	Q13203	477 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	TCHHL1	Q5QJ38	904 aa	Predicted RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	FAM180B	Q6P0A1	224 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	WDR53	Q7Z5U6	358 aa	Predicted RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ULK2	Q8IYT8	1036 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	MNS1	Q8NEH6	495 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	SPPL2A	Q8TCT8	520 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ADIPOR1	Q96A54	375 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF559	Q9BR84	538 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ACKR4	Q9NPB9	350 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	QPCTL	Q9NXS2	382 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	BCAP29	Q9UHQ4	241 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF180	Q9UJW8	692 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	DTX4	Q9Y2E6	619 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	PCDHA9	Q9Y5H5	950 aa		19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	ANKRD17	O75179	2603 aa	Known RBP	19.78	■□□□□ 0.76
FARP1-231	ENST00000600648	EXOC1L	A0A1B0GW35	172 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	OR4F21	O95013	312 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	SNRPA	P09012	282 aa	Known RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	CTAGE8	P0CG41	777 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	GABRA1	P14867	456 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	KRT15	P19012	456 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	MASP1	P48740	699 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	ALDH9A1	P49189	494 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	WNT3	P56703	355 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	GALNT1	Q10472	559 aa	Predicted RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	DUSP8	Q13202	625 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	SNTB1	Q13884	538 aa	Known RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	EXOSC7	Q15024	291 aa	Known RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	TOMM20	Q15388	145 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	TBCEL	Q5QJ74	424 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	C10orf62	Q5T681	223 aa	Predicted RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	SLC48A1	Q6P1K1	146 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	CTAGE4	Q8IX94	777 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	CLYBL	Q8N0X4	340 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	VWA5B2	Q8N398	1253 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	ADCY4	Q8NFM4	1077 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	GNRHR2	Q96P88	292 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	NXF5	Q9H1B4	397 aa	Known RBP	19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	ZNF225	Q9UK10	706 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	CES1P1	Q9UKY3	287 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	SNX6	Q9UNH7	406 aa		19.77	■□□□□ 0.76
FARP1-231	ENST00000600648	SPG11	Q96JI7	2443 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	C1orf226	A1L170	272 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	ANKRD33B	A6NCL7	494 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	GUCY1B2	O75343	617 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	S1PR1	P21453	382 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	GPX3	P22352	226 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	TMED10	P49755	219 aa	Known RBP	19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	DUSP2	Q05923	314 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	DESI1	Q6ICB0	168 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	TMEM200A	Q86VY9	491 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	TMEM151A	Q8N4L1	468 aa		19.76	■□□□□ 0.75
FARP1-231	ENST00000600648	C1orf52	Q8N6N3	182 aa	Known RBP	19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms