RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 ACER2Q5QJU3 275 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ABHD17BQ5VST6 288 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 FCRLBQ6BAA4 426 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 IGFL3Q6UXB1 125 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 RNF111Q6ZNA4 994 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ASB18Q6ZVZ8 466 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 HPS6Q86YV9 775 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ZNF615Q8N8J6 731 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 OR5L2Q8NGL0 311 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ZFP28Q8NHY6 868 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 NUDT8Q8WV74 236 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 TESCQ96BS2 214 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ERP27Q96DN0 273 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 BHLHE41Q9C0J9 482 aaPredicted RBP17.97■□□□□ 0.47
UPF1-209ENST00000600310 SLC25A18Q9H1K4 315 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 CDCP1Q9H5V8 836 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 ZBTB20Q9HC78 741 aaPredicted RBP17.97■□□□□ 0.47
UPF1-209ENST00000600310 ZNF71Q9NQZ8 489 aaPredicted RBP17.97■□□□□ 0.47
UPF1-209ENST00000600310 SDR39U1Q9NRG7 319 aaPredicted RBP17.97■□□□□ 0.47
UPF1-209ENST00000600310 STMN3Q9NZ72 180 aa17.97■□□□□ 0.47
UPF1-209ENST00000600310 TMEM200CA6NKL6 621 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 OR6C76A6NM76 312 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 PLOD2O00469 737 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 PLOD3O60568 738 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 IFI6P09912 130 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 CLNS1AP54105 237 aaKnown RBP17.96■□□□□ 0.47
UPF1-209ENST00000600310 MLF1P58340 268 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 UFM1P61960 85 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 MRPS35P82673 323 aaKnown RBP17.96■□□□□ 0.47
UPF1-209ENST00000600310 SRSF11Q05519 484 aaKnown RBP17.96■□□□□ 0.47
UPF1-209ENST00000600310 MLC1Q15049 377 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 RPS6KA2Q15349 733 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 TRMT12Q53H54 448 aaKnown RBP17.96■□□□□ 0.47
UPF1-209ENST00000600310 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 LINC00696Q6ZRV3 163 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 C9orf40Q8IXQ3 194 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 NUBPLQ8TB37 319 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 TM9SF4Q92544 642 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 KAT2AQ92830 837 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 MARK4Q96L34 752 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 TEX37Q96LM6 180 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 DUSP26Q9BV47 211 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 OR10A5Q9H207 317 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 CLMPQ9H6B4 373 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 EPS8L2Q9H6S3 715 aa17.96■□□□□ 0.47
UPF1-209ENST00000600310 DOCK10Q96BY6 2186 aa17.96■□□□□ 0.46
UPF1-209ENST00000600310 A0A087WV62 115 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 E9PBE3 544 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 MAN1A2O60476 641 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 BCAS2O75934 225 aaPredicted RBP17.95■□□□□ 0.46
UPF1-209ENST00000600310 CBX7O95931 251 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 MRPL19P49406 292 aaKnown RBP17.95■□□□□ 0.46
UPF1-209ENST00000600310 GYS2P54840 703 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 MANFP55145 182 aaKnown RBP17.95■□□□□ 0.46
UPF1-209ENST00000600310 NME5P56597 212 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 DPY19L1Q2PZI1 675 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 SLC29A4Q7RTT9 530 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 ZNF551Q7Z340 670 aaPredicted RBP17.95■□□□□ 0.46
UPF1-209ENST00000600310 OR8J2Q8NGG1 315 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 THAP3Q8WTV1 239 aaPredicted RBP17.95■□□□□ 0.46
UPF1-209ENST00000600310 RNF32Q9H0A6 362 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 ZIM2Q9NZV7 527 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 MYOTQ9UBF9 498 aa17.95■□□□□ 0.46
UPF1-209ENST00000600310 A0A0G2JND7 137 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 A0A1W2PRB8 838 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 CDK2AP1O14519 115 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 IL12AP29459 219 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 KIR3DL1P43629 444 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 WNT3P56703 355 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 HSPB3Q12988 150 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 DUSP8Q13202 625 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 EXOSC7Q15024 291 aaKnown RBP17.94■□□□□ 0.46
UPF1-209ENST00000600310 EBPQ15125 230 aaKnown RBP17.94■□□□□ 0.46
UPF1-209ENST00000600310 PGS1Q32NB8 556 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 FHL5Q5TD97 284 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 BEST3Q8N1M1 668 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 GLB1L3Q8NCI6 653 aaPredicted RBP17.94■□□□□ 0.46
UPF1-209ENST00000600310 SIMC1Q8NDZ2 872 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 OR7G2Q8NG99 324 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 OR52R1Q8NGF1 315 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 OR5P2Q8WZ92 322 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 HAS2Q92819 552 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 ELP4Q96EB1 424 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 CHMP6Q96FZ7 201 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 ABI3Q9P2A4 366 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 BCAP29Q9UHQ4 241 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 CFL2Q9Y281 166 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 MGAQ8IWI9 3026 aa17.94■□□□□ 0.46
UPF1-209ENST00000600310 CROCCQ5TZA2 2017 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 FCHO1O14526 889 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 DPM1O60762 260 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 PRAMEF2O60811 474 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 SLC22A3O75751 556 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 EFNA1P20827 205 aaPredicted RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 MC3RP41968 323 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 PHC1P78364 1004 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 IRX1P78414 480 aaPredicted RBP17.93■□□□□ 0.46
UPF1-209ENST00000600310 SPANXN4Q5MJ08 99 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 OR4F3Q6IEY1 312 aa17.93■□□□□ 0.46
UPF1-209ENST00000600310 TMEM107Q6UX40 140 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms