RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 AGR3Q8TD06 166 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 EXOSC8Q96B26 276 aaKnown RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 CTHRC1Q96CG8 243 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 FCRL1Q96LA6 429 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 GAL3ST4Q96RP7 486 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 BRINP2Q9C0B6 783 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 OR10A5Q9H207 317 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 SLC35C2Q9NQQ7 365 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 RYDENQ9NUL5 291 aaKnown RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 TAS2R7Q9NYW3 318 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 KLRC4-KLRK1H3BQV0 150 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 ITM2AO43736 263 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 PEX1O43933 1283 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 WISP2O76076 250 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 SERPINE1P05121 402 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 TACR1P25103 407 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 PTGER1P34995 402 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 UBAP2LQ14157 1087 aaKnown RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 LTB4RQ15722 352 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 CHI3L2Q15782 390 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF791Q3KP31 576 aaPredicted RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 RFTN2Q52LD8 501 aaPredicted RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 TRMT12Q53H54 448 aaKnown RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 LYPD8Q6UX82 237 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 IKBIPQ70UQ0 350 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 TICAM1Q8IUC6 712 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 DDIASQ8IXT1 998 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 CCDC116Q8IYX3 515 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 FAM26EQ8N5C1 309 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 CPSF7Q8N684 471 aaKnown RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF441Q8N8Z8 693 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 SLC22A8Q8TCC7 542 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 TP53INP1Q96A56 240 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 EGLN2Q96KS0 407 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 SGCZQ96LD1 299 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 TMBIM4Q9HC24 238 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 PFDN4Q9NQP4 134 aa15.46■□□□□ 0.07
SSBP4-204ENST00000597724 EXO1Q9UQ84 846 aaKnown RBP15.46■□□□□ 0.07
SSBP4-204ENST00000597724 UTP20O75691 2785 aaKnown RBP15.46■□□□□ 0.06
SSBP4-204ENST00000597724 MYO1GB0I1T2 1018 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 TMEM114B3SHH9 223 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 LYPLA1O75608 230 aaPredicted RBP15.45■□□□□ 0.06
SSBP4-204ENST00000597724 HSPA4LO95757 839 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 CBX7O95931 251 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 MPIP34949 423 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 MEOX1P50221 254 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 ALDH6A1Q02252 535 aaKnown RBP15.45■□□□□ 0.06
SSBP4-204ENST00000597724 CASP8Q14790 479 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 PRSS53Q2L4Q9 553 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 XKR7Q5GH72 579 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 RNFT1Q5M7Z0 435 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 FHL5Q5TD97 284 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 RTL4Q6ZR62 310 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 GOLM1Q8NBJ4 401 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 POGLUT1Q8NBL1 392 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 SIMC1Q8NDZ2 872 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 C16orf52Q8NHV5 167 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF675Q8TD23 568 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 ADIPOR1Q96A54 375 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 TLCD1Q96CP7 247 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 CCT7Q99832 543 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF395Q9H8N7 513 aaPredicted RBP15.45■□□□□ 0.06
SSBP4-204ENST00000597724 DEPPQ9NTK1 212 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 GIMAP4Q9NUV9 329 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 ENTPD4Q9Y227 616 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 TMED5Q9Y3A6 229 aa15.45■□□□□ 0.06
SSBP4-204ENST00000597724 TMEM120BA0PK00 339 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 FBXO45P0C2W1 286 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 PCSK2P16519 638 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 SDC1P18827 310 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 GPX3P22352 226 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 GRK2P25098 689 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 NR0B1P51843 470 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 GPR85P60893 370 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 ABCE1P61221 599 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 MAGOHP61326 146 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 RPL38P63173 70 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 MRPS35P82673 323 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 DUSP8Q13202 625 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 EXOSC7Q15024 291 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 GALNTL6Q49A17 601 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF628Q5EBL2 1059 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 HLA-DQA1Q5Y7H0 255 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 SIAH3Q8IW03 269 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 DND1Q8IYX4 353 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 TAGAPQ8N103 731 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 ZFP62Q8NB50 900 aaPredicted RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 C17orf47Q8NEP4 570 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 ERP27Q96DN0 273 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 SPACA9Q96E40 222 aaPredicted RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 C3orf30Q96M34 536 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 BBS4Q96RK4 519 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 MIEF1Q9NQG6 463 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 SEC14L3Q9UDX4 400 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 BCAP29Q9UHQ4 241 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 CFL2Q9Y281 166 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 DTX4Q9Y2E6 619 aa15.44■□□□□ 0.06
SSBP4-204ENST00000597724 SETXQ7Z333 2677 aaKnown RBP15.44■□□□□ 0.06
SSBP4-204ENST00000597724 ATP6AP2A0A1C7CYW4 349 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 PEX11AO75192 247 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms