RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 OR9A2Q8NGT5 310 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 MTERF3Q96E29 417 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 GAL3ST4Q96RP7 486 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 CLMPQ9H6B4 373 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 SLCO1B3Q9NPD5 702 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ANKRD10Q9NXR5 420 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ASIC5Q9NY37 505 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 MYOTQ9UBF9 498 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 BCAP29Q9UHQ4 241 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 YARS2Q9Y2Z4 477 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 NUP214P35658 2090 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 TRAV17A0A0B4J275 112 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 GOLGA8QA0A0J9YX86 632 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 GOLGA8OA6NCC3 632 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 GOLGA8NF8WBI6 632 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 WWP2O00308 870 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 SCAMP2O15127 329 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 TBX19O60806 448 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 WISP1O95388 367 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 G6PDP11413 515 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 TNFSF10P50591 281 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 SSR4P51571 173 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 TUBA3CQ13748 450 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 PLEKHN1Q494U1 663 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 HLA-DQA1Q5Y7H0 255 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 NXNQ6DKJ4 435 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 TUBA3EQ6PEY2 450 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 C16orf47Q6ZP98 133 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 LARP4Q71RC2 724 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 NUBPLQ8TB37 319 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF675Q8TD23 568 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 KAT2AQ92830 837 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF764Q96H86 408 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 OR10A5Q9H207 317 aa18.24■□□□□ 0.51
SHKBP1-214ENST00000597396 BSNQ9UPA5 3926 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 TMEM200CA6NKL6 621 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 CDK2AP1O14519 115 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 SUV39H1O43463 412 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 OR2J2O76002 312 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 CLPSP04118 112 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 PCSK2P16519 638 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 EPHA3P29320 983 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 CD96P40200 585 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 CYB561P49447 251 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 MRPS35P82673 323 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 MGAT2Q10469 447 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 PDE7AQ13946 482 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 EXOSC7Q15024 291 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF385BQ569K4 471 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF628Q5EBL2 1059 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 FAM47EQ6ZV65 393 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 ZFP28Q8NHY6 868 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 ASB15Q8WXK1 588 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 TRIM4Q9C037 500 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 WWTR1Q9GZV5 400 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 WDR55Q9H6Y2 383 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 LRFN1Q9P244 771 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 ATP6V1HQ9UI12 483 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 MAPRE3Q9UPY8 281 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 CFL2Q9Y281 166 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 USH1CQ9Y6N9 552 aa18.23■□□□□ 0.51
SHKBP1-214ENST00000597396 EXPH5Q8NEV8 1989 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 C2orf92A0A1B0GVN3 265 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 TTLL8A6PVC2 850 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 PRPS1L1P21108 318 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 S1PR1P21453 382 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 HLCSP50747 726 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 DIO3P55073 304 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 EBPQ15125 230 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 OR1C1Q15619 314 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 TRMT12Q53H54 448 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 OGFOD2Q6N063 350 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 HORMAD2Q8N7B1 307 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF615Q8N8J6 731 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 Q8NA96 180 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 OR7A2PQ8NGA2 310 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 SLC22A8Q8TCC7 542 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 CIDECQ96AQ7 238 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 CTHRC1Q96CG8 243 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 AMDHD1Q96NU7 426 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 RASL10BQ96S79 203 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 PRPF18Q99633 342 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 GLIPR2Q9H4G4 154 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF639Q9UID6 485 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 MYO18BQ8IUG5 2567 aa18.22■□□□□ 0.51
SHKBP1-214ENST00000597396 A8MVJ9 347 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 PRAMEF2O60811 474 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 DIAPH2O60879 1101 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 BCAS2O75934 225 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 SORBS2O94875 1100 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 SLITRK5O94991 958 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 CBX7O95931 251 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 CD46P15529 392 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 TRHRP34981 398 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 GPC1P35052 558 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 CLDN8P56748 225 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 MPEG1Q2M385 716 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 SLC9B1Q4ZJI4 515 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 CPTPQ5TA50 214 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms