RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZBTB20Q9HC78 741 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF71Q9NQZ8 489 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 FAM120CQ9NX05 1096 aaKnown RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 C19orf25Q9UFG5 118 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 NDUFAF1Q9Y375 327 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 ZGRF1Q86YA3 2104 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 PRSS51A0A1B0GVH4 220 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 BBIP1A8MTZ0 92 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 PCDH17O14917 1159 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ANGPT2O15123 496 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 PDPK1O15530 556 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 GPR75O95800 540 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ITGAMP11215 1152 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ESRRAP11474 423 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-207ENST00000597136 EFNA1P20827 205 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ITGA3P26006 1051 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 FRKP42685 505 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-207ENST00000597136 IGLV3-21P80748 117 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-207ENST00000597136 KCNAB2Q13303 367 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 MAPKAPK3Q16644 382 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 BTBD16Q32M84 506 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ANXA8L1Q5VT79 327 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 RETREG3Q86VR2 466 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 NATD1Q8N6N6 113 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 PSMF1Q92530 271 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF681Q96N22 645 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 LPAR4Q99677 370 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF552Q9H707 407 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-207ENST00000597136 SLAMF7Q9NQ25 335 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF780BQ9Y6R6 833 aa13.98□□□□□ -0.17
TRIM28-207ENST00000597136 MYO1GB0I1T2 1018 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 IFNA16P05015 189 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 CALB2P22676 271 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 CPA2P48052 419 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 XKP51811 444 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 SOX8P57073 446 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 SLC26A5P58743 744 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 BNIP1Q12981 228 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 CEBPEQ15744 281 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 MMEL1Q495T6 779 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 COQ5Q5HYK3 327 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 REP15Q6BDI9 236 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 SLC2A7Q6PXP3 512 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 ANKRD46Q86W74 232 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 SAMD14Q8IZD0 417 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 KIF2BQ8N4N8 673 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 VPS37AQ8NEZ2 397 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 PTPMT1Q8WUK0 201 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 GTF2H4Q92759 462 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 RCN3Q96D15 328 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 VPS50Q96JG6 964 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 CCDC115Q96NT0 180 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 BBS4Q96RK4 519 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 UBL7Q96S82 380 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 NPAS2Q99743 824 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 RMND5AQ9H871 391 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 SERHLQ9NQF3 203 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 ACSS1Q9NUB1 689 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 GIMAP4Q9NUV9 329 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 MAP10Q9P2G4 905 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 LEF1Q9UJU2 399 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-207ENST00000597136 ENTPD4Q9Y227 616 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 TP53TG5Q9Y2B4 290 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 PCNX3Q9H6A9 2034 aa13.97□□□□□ -0.17
TRIM28-207ENST00000597136 MKRN2OSH3BPM6 223 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 MRASO14807 208 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ATXN7O15265 892 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 SERPINA7P05543 415 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 CSNK2A2P19784 350 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 NTSP30990 170 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 PTGER1P34995 402 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 FEN1P39748 380 aaKnown RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ST13P50502 369 aaKnown RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 MNAT1P51948 309 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 PLIN5Q00G26 463 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 DUSP2Q05923 314 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 MYBPC3Q14896 1274 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ZSCAN26Q16670 478 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 PLAG1Q6DJT9 500 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 CCDC121Q6ZUS5 278 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 KBTBD2Q8IY47 623 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 CLECL1Q8IZS7 167 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 DPP10Q8N608 796 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF321PQ8N8H1 164 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 BRIX1Q8TDN6 353 aaKnown RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ITCHQ96J02 903 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 AMDHD1Q96NU7 426 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 LHPPQ9H008 270 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 EFCAB1Q9HAE3 211 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 GPR83Q9NYM4 423 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 BTNL2Q9UIR0 455 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 ERVK-11Q9UQG0 969 aa13.96□□□□□ -0.17
TRIM28-207ENST00000597136 A0A1W2PRB8 838 aa13.96□□□□□ -0.18
TRIM28-207ENST00000597136 SAGE2PA6NJ88 616 aa13.96□□□□□ -0.18
TRIM28-207ENST00000597136 HRKO00198 91 aa13.96□□□□□ -0.18
TRIM28-207ENST00000597136 AIM2O14862 343 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms