RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LRRC25Q8N386 305 aaPredicted RBP19.48■□□□□ 0.71
PNKP-209ENST00000596726 VWA5B2Q8N398 1253 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 ADIPOR1Q96A54 375 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 TP53INP1Q96A56 240 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 ZBTB9Q96C00 473 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 GPR137Q96N19 417 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 GAL3ST4Q96RP7 486 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 LRTM1Q9HBL6 345 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 SH2D2AQ9NP31 389 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 MYNNQ9NPC7 610 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 SLC35C2Q9NQQ7 365 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 DEPPQ9NTK1 212 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 C1orf109Q9NX04 203 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 SEC14L3Q9UDX4 400 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 EXO1Q9UQ84 846 aaKnown RBP19.48■□□□□ 0.71
PNKP-209ENST00000596726 POLR3HQ9Y535 204 aaPredicted RBP19.48■□□□□ 0.71
PNKP-209ENST00000596726 FLNBO75369 2602 aaKnown RBP19.48■□□□□ 0.71
PNKP-209ENST00000596726 EXPH5Q8NEV8 1989 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 C2orf92A0A1B0GVN3 265 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 BIRC5O15392 142 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 SEC22BO75396 215 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 AGFG2O95081 481 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 STSP08842 583 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 LINC00032P0C843 101 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 NEFHP12036 1026 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 DDCP20711 480 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 PTGER1P34995 402 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 C2orf80Q0P641 193 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 DUSP8Q13202 625 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 PRSS53Q2L4Q9 553 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 KRTCAP3Q53RY4 240 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 SH2D4BQ5SQS7 431 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 GFRALQ6UXV0 394 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 CCDC116Q8IYX3 515 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 ZFP62Q8NB50 900 aaPredicted RBP19.47■□□□□ 0.71
PNKP-209ENST00000596726 ADCY4Q8NFM4 1077 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 C16orf52Q8NHV5 167 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 ZNF675Q8TD23 568 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 TWIST2Q8WVJ9 160 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 EXOSC8Q96B26 276 aaKnown RBP19.47■□□□□ 0.71
PNKP-209ENST00000596726 PKNOX2Q96KN3 472 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 BRINP2Q9C0B6 783 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 TAS2R7Q9NYW3 318 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 ZDHHC2Q9UIJ5 367 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 ERRFI1Q9UJM3 462 aaPredicted RBP19.47■□□□□ 0.71
PNKP-209ENST00000596726 OSGIN2Q9Y236 505 aa19.47■□□□□ 0.71
PNKP-209ENST00000596726 LSM1O15116 133 aaKnown RBP19.46■□□□□ 0.71
PNKP-209ENST00000596726 UNC5CO95185 931 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 ZWINTO95229 277 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 CBX7O95931 251 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 FBXO45P0C2W1 286 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 GPR85P60893 370 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 LTB4RQ15722 352 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 ZNF628Q5EBL2 1059 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 IKBIPQ70UQ0 350 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 DND1Q8IYX4 353 aaKnown RBP19.46■□□□□ 0.71
PNKP-209ENST00000596726 C17orf47Q8NEP4 570 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 SPACA9Q96E40 222 aaPredicted RBP19.46■□□□□ 0.71
PNKP-209ENST00000596726 SLC5A6Q9Y289 635 aa19.46■□□□□ 0.71
PNKP-209ENST00000596726 PINLYPA6NC86 204 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 WIPF3A6NGB9 483 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 NPIPA5E9PKD4 350 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 PIP5K1BO14986 540 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 MYZAPP0CAP1 466 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 ZNF24P17028 368 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 CNR1P21554 472 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 GPX3P22352 226 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 TACR1P25103 407 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 NR0B1P51843 470 aaKnown RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 EXOSC7Q15024 291 aaKnown RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 RFTN2Q52LD8 501 aaPredicted RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 TRMT12Q53H54 448 aaKnown RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 TICAM1Q8IUC6 712 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 SIMC1Q8NDZ2 872 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 OR2M7Q8NG81 312 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 CDC26Q8NHZ8 85 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 EGLN2Q96KS0 407 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 TSPAN10Q9H1Z9 355 aaPredicted RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 PFDN4Q9NQP4 134 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 GIMAP4Q9NUV9 329 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 NPIPA1Q9UND3 350 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 ENTPD4Q9Y227 616 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 CFL2Q9Y281 166 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 DTX4Q9Y2E6 619 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 DIDO1Q9BTC0 2240 aaKnown RBP19.45■□□□□ 0.7
PNKP-209ENST00000596726 NINQ8N4C6 2090 aa19.45■□□□□ 0.7
PNKP-209ENST00000596726 USP9YO00507 2555 aaPredicted RBP19.44■□□□□ 0.7
PNKP-209ENST00000596726 WDR91A4D1P6 747 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 MYO1GB0I1T2 1018 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 ASNA1O43681 348 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 RNF224P0DH78 156 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 CCL3P10147 92 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 PCSK2P16519 638 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 NTRK2Q16620 822 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 C4orf17Q53FE4 359 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 XKR7Q5GH72 579 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 HLA-DQA1Q5Y7H0 255 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 DDIASQ8IXT1 998 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 TAGAPQ8N103 731 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 AGR3Q8TD06 166 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms