RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 C6orf136Q5SQH8 315 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 ATCAYQ86WG3 371 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 HORMAD2Q8N7B1 307 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 ZNF75CPQ92670 426 aaPredicted RBP10.28□□□□□ -0.76
LIG1-211ENST00000596457 TMEM125Q96AQ2 219 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 SNRNP40Q96DI7 357 aaKnown RBP10.28□□□□□ -0.76
LIG1-211ENST00000596457 METTL2AQ96IZ6 378 aaKnown RBP10.28□□□□□ -0.76
LIG1-211ENST00000596457 MAGED4Q96JG8 741 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 C5orf34Q96MH7 638 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 ZNF681Q96N22 645 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 RNF32Q9H0A6 362 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 ANKRA2Q9H9E1 313 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 ASF1BQ9NVP2 202 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 THAP1Q9NVV9 213 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 MAT2BQ9NZL9 334 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 MYOTQ9UBF9 498 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 EIF3LQ9Y262 564 aaKnown RBP10.28□□□□□ -0.76
LIG1-211ENST00000596457 TMED5Q9Y3A6 229 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
LIG1-211ENST00000596457 TLN1Q9Y490 2541 aaKnown RBP10.28□□□□□ -0.76
LIG1-211ENST00000596457 GOLGA8QA0A0J9YX86 632 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 C2orf92A0A1B0GVN3 265 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 GOLGA8OA6NCC3 632 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 A8MVJ9 347 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 NPIPB8E9PQR5 432 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 GOLGA8NF8WBI6 632 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 OR6B1O95007 311 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 SNUPNO95149 360 aaKnown RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 RASAL1O95294 804 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 CLPSP04118 112 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 IGKV3-11P04433 115 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 ATP1B1P05026 303 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 SP1P08047 785 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 EFNA1P20827 205 aaPredicted RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 NTSP30990 170 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 MPIP34949 423 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 HLCSP50747 726 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 NR0B1P51843 470 aaKnown RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 SLC37A1P57057 533 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 PMP22Q01453 160 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 MAP4K2Q12851 820 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 SLC25A25Q6KCM7 469 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 IKBIPQ70UQ0 350 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 SAMD14Q8IZD0 417 aaPredicted RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 FAM9CQ8IZT9 166 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 LGI4Q8N135 537 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 CYP4Z2PQ8N1L4 340 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 SIMC1Q8NDZ2 872 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 OR9A2Q8NGT5 310 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 OR8K3Q8NH51 312 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 RAB3IL1Q8TBN0 382 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 LRRC8CQ8TDW0 803 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 PPCDCQ96CD2 204 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 RASL10BQ96S79 203 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 CCT7Q99832 543 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 REEP4Q9H6H4 257 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 AKTIPQ9H8T0 292 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 HPF1Q9NWY4 346 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 NTNG1Q9Y2I2 539 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 WBP11Q9Y2W2 641 aaKnown RBP10.27□□□□□ -0.77
LIG1-211ENST00000596457 C2CD3Q4AC94 2353 aa10.27□□□□□ -0.77
LIG1-211ENST00000596457 EML6Q6ZMW3 1958 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 OR6C76A6NM76 312 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 MYO1GB0I1T2 1018 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 PDPK1O15530 556 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 ZNF354AO60765 605 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 SNNO75324 88 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 VPS4BO75351 444 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 NME6O75414 186 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 SLC25A12O75746 678 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 PRPS2P11908 318 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 S1PR1P21453 382 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 GPC1P35052 558 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 ASMTP46597 345 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 MGAT2Q10469 447 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 FUT7Q11130 342 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 MAD2L1Q13257 205 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 NNATQ16517 81 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 ZNF385BQ569K4 471 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 NXNQ6DKJ4 435 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 FAM180AQ6UWF9 173 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 TMEM64Q6YI46 380 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 GALNTL5Q7Z4T8 443 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 WDR75Q8IWA0 830 aaKnown RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 PRR22Q8IZ63 422 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 KIRREL3Q8IZU9 778 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 ZNF615Q8N8J6 731 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 TMEM178AQ8NBL3 297 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 MDS2Q8NDY4 140 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 OR7G1Q8NGA0 311 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 OR7A2PQ8NGA2 310 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 OR5M3Q8NGP4 307 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 C16orf52Q8NHV5 167 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms