RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TUBGCP3Q96CW5 907 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 SGCZQ96LD1 299 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 GAL3ST4Q96RP7 486 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 WWTR1Q9GZV5 400 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 OLAHQ9NV23 265 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 MAT2BQ9NZL9 334 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 PRODH2Q9UF12 536 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 BCAP29Q9UHQ4 241 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 CAPN14A8MX76 684 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 SLITRK5O94991 958 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 CT62P0C5K7 136 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 PRPS2P11908 318 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 EDN3P14138 238 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 NTSP30990 170 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 RPL3P39023 403 aaKnown RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 SOX3P41225 446 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 ST13P50502 369 aaKnown RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 NRG3P56975 720 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 MGAT2Q10469 447 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 BST1Q10588 318 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 EBPQ15125 230 aaKnown RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 SMU1Q2TAY7 513 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 FAM111BQ6SJ93 734 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 C16orf47Q6ZP98 133 aaPredicted RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 RTL4Q6ZR62 310 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 GALNTL5Q7Z4T8 443 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 R3HCC1LQ7Z5L2 792 aaKnown RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF781Q8N8C0 355 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF615Q8N8J6 731 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 POGLUT1Q8NBL1 392 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 ARL8AQ96BM9 186 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 CTHRC1Q96CG8 243 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF764Q96H86 408 aaPredicted RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 CLMPQ9H6B4 373 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 THAP1Q9NVV9 213 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 HAO1Q9UJM8 370 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 EIF3LQ9Y262 564 aaKnown RBP16■□□□□ 0.15
SHKBP1-212ENST00000596163 NTNG1Q9Y2I2 539 aa16■□□□□ 0.15
SHKBP1-212ENST00000596163 MYO1GB0I1T2 1018 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 TCP11X1B4DZS4 312 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 OR6B1O95007 311 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 CLPSP04118 112 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 BCKDHAP12694 445 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 SDC1P18827 310 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 S1PR1P21453 382 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 DCAF7P61962 342 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 C6orf136Q5SQH8 315 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 CES4AQ5XG92 561 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 FAM180BQ6P0A1 224 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 FNDC5Q8NAU1 212 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 GOLM1Q8NBJ4 401 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 ST6GALNAC3Q8NDV1 305 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 C17orf47Q8NEP4 570 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 ADCY4Q8NFM4 1077 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 MTERF3Q96E29 417 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 TSSK3Q96PN8 268 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 TAAR6Q96RI8 345 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 SORT1Q99523 831 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 ACBD3Q9H3P7 528 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 REEP4Q9H6H4 257 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 MANSC1Q9H8J5 431 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF395Q9H8N7 513 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF639Q9UID6 485 aa15.99■□□□□ 0.15
SHKBP1-212ENST00000596163 GCN1Q92616 2671 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ATP6AP2A0A1C7CYW4 349 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ASPDHA6ND91 283 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ANKUB1A6NFN9 424 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 PEX1O43933 1283 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 TBX19O60806 448 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ATP6AP2O75787 350 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 CBX6O95503 412 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 TACR1P25103 407 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 NR0B1P51843 470 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 NCBP2P52298 156 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 PDCD2Q16342 344 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF628Q5EBL2 1059 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF227Q86WZ6 799 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 PSD4Q8NDX1 1056 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 NR4A3Q92570 626 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 PPCDCQ96CD2 204 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 EGLN2Q96KS0 407 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 C3orf30Q96M34 536 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 HES7Q9BYE0 225 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 C20orf27Q9GZN8 174 aa15.98■□□□□ 0.15
SHKBP1-212ENST00000596163 CPAMD8Q8IZJ3 1885 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SLCO1B7G3V0H7 640 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 TP53I11O14683 189 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 PDPK1O15530 556 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 AKAP10O43572 662 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 PLOD3O60568 738 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 P04436 131 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 PCSK2P16519 638 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 GNLYP22749 145 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 HPCAL1P37235 193 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 TMED10P49755 219 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 PSPHP78330 225 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 RPP38P78345 283 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms