RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TNNI3P19429 210 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 MSX2P35548 267 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GSK3BP49841 420 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 PRKAG1P54619 331 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 CLDN6P56747 220 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 RAB15P59190 212 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 BTG2P78543 158 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 DUSP2Q05923 314 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 TRAP1Q12931 704 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 EIF3IQ13347 325 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 SERTAD2Q14140 314 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 TRIM25Q14258 630 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 NKAIN1Q4KMZ8 207 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 MED25Q71SY5 747 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 C6orf120Q7Z4R8 191 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 FAM156AQ8NDB6 213 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 TNIP2Q8NFZ5 429 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 OR9A2Q8NGT5 310 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 OR5AK3PQ8NH89 298 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 PSMA8Q8TAA3 256 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 SUN3Q8TAQ9 357 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 CCDC124Q96CT7 223 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 ELP4Q96EB1 424 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 WBP1Q96G27 269 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 LIN37Q96GY3 246 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 RBM18Q96H35 190 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 ZNF583Q96ND8 569 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 PTCHD1Q96NR3 888 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 ZPBPQ9BS86 351 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 ALG2Q9H553 416 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 IFT80Q9P2H3 777 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 PISDQ9UG56 409 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GPN3Q9UHW5 284 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 POMPQ9Y244 141 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GMEB1Q9Y692 573 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 SPTAN1Q13813 2472 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 MEN1O00255 615 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 JRKO75564 520 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ONECUT2O95948 504 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 IFNA16P05015 189 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ITIH1P19827 911 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 HTR1EP28566 365 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 CRATP43155 626 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ELF3P78545 371 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 PRR5P85299 388 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 RHDQ02161 417 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 BNIP2Q12982 314 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 GAB1Q13480 694 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 MAP7Q14244 749 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 RGNQ15493 299 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 MINDY4Q4G0A6 757 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 VWA2Q5GFL6 755 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 MLIPQ5VWP3 458 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 TMEM107Q6UX40 140 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 TMEM64Q6YI46 380 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 OVCH1Q7RTY7 1134 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 PRICKLE2Q7Z3G6 844 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SZRD1Q7Z422 152 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SPACA3Q8IXA5 215 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC38A9Q8NBW4 561 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ADCY4Q8NFM4 1077 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 OR56A1Q8NGH5 318 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 OR52N2Q8NGI0 321 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 PNPT1Q8TCS8 783 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SFXN5Q8TD22 340 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 KAT2AQ92830 837 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 LRGUKQ96M69 825 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 DGAT2Q96PD7 388 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 PELOQ9BRX2 385 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ASPSCR1Q9BZE9 553 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 IKZF5Q9H5V7 419 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 KAT8Q9H7Z6 458 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 LANCL2Q9NS86 450 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SIRT3Q9NTG7 399 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ZCCHC3Q9NUD5 404 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SUCOQ9UBS9 1254 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ACSL6Q9UKU0 697 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 AK5Q9Y6K8 562 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 SCN2AQ99250 2005 aa12.23□□□□□ -0.45
SHKBP1-209ENST00000595803 ELOVL7A1L3X0 281 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 FAM220BPB1ANY3 271 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PLOD2O00469 737 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SLITRK5O94991 958 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ATP1B1P05026 303 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ZNF28P17035 718 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 MATN1P21941 496 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PTGER1P34995 402 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 RORAP35398 523 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SOX11P35716 441 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ETV5P41161 510 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PRIM2P49643 509 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ANXA11P50995 505 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 IGLV3-21P80748 117 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms