RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MARK1Q9P0L2 795 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 STOX2Q9P2F5 926 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 LHX3Q9UBR4 397 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ZNF69Q9UC07 566 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SCP2D1Q9UJQ7 156 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SLC27A6Q9Y2P4 619 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 MYO15AQ9UKN7 3530 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TRIP11Q15643 1979 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FER1L6Q2WGJ9 1857 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 C2orf78A6NCI8 922 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 METTL21EPA6NDL7 271 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 GABRR3A8MPY1 467 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CTDSP2O14595 271 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 MID1O15344 667 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 INPPL1O15357 1258 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ERAL1O75616 437 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 PAHP00439 452 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TGFB1P01137 390 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ALPPL2P10696 532 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CPEP16870 476 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 DDCP20711 480 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 COL9A1P20849 921 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 NDUFS1P28331 727 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 GABRR2P28476 465 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 RORAP35398 523 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 XCR1P46094 333 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR3A3P47888 321 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SLC6A12P48065 614 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 RNF144AP50876 292 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 NCBP2P52298 156 aaKnown RBP eCLIP3.36□□□□□ -1.872e-25■□□□□ 10.3
VMP1-216ENST00000592790 ABATP80404 500 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FGL1Q08830 312 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SNTA1Q13424 505 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SEC23BQ15437 767 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FAM189A2Q15884 450 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 UGT8Q16880 541 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 RGMBQ6NW40 437 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 LCTLQ6UWM7 567 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 COMMD6Q7Z4G1 85 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 C6orf120Q7Z4R8 191 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 IZUMO1Q8IYV9 350 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FAM26EQ8N5C1 309 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 NKAIN3Q8N8D7 197 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SYT14Q8NB59 555 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR10H4Q8NGA5 316 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR4K5Q8NGD3 323 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR4K1Q8NGD4 311 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR52N1Q8NH53 320 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 MOSPD2Q8NHP6 518 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 BTN2A2Q8WVV5 523 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ASB13Q8WXK3 278 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 GLYATL1Q969I3 302 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 S100A16Q96FQ6 103 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 RPL10LQ96L21 214 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 RTP3Q9BQQ7 232 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 AIFM2Q9BRQ8 373 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TMED9Q9BVK6 235 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 EPHX3Q9H6B9 360 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ZNF304Q9HCX3 659 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TMEM138Q9NPI0 162 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SPATA6Q9NWH7 488 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 TXNL4BQ9NX01 149 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 NLKQ9UBE8 527 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CKLFQ9UBR5 152 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CACNG2Q9Y698 323 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 KRBOX1C9JBD0 128 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 H0YC42 278 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SYT5O00445 386 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 HMGB3O15347 200 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 KCNJ13O60928 360 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FBXO24O75426 580 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 SOX14O95416 240 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CYP17A1P05093 508 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 PRSS56P0CW18 603 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SAGP10523 405 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 HK1P19367 917 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CELP19835 753 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 IDSP22304 550 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SLC6A6P31641 620 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 MASP1P48740 699 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CDKN1CP49918 316 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 ZNF81P51508 661 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ARFIP1P53367 373 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 KCNJ10P78508 379 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 DSC1Q08554 894 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 DUSP7Q16829 419 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FAM26DQ5JW98 314 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 PRPF38BQ5VTL8 546 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 KIAA1161Q6NSJ0 714 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ARMC6Q6NXE6 501 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 CRTC1Q6UUV9 634 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FAM198BQ6UWH4 519 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 MOB2Q70IA6 237 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 BHLHA9Q7RTU4 235 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 AMZ2Q86W34 360 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 YAF2Q8IY57 180 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ADGRG2Q8IZP9 1017 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SPAG16Q8N0X2 631 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms