RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 STEAP1BQ6NZ63 245 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 FAM159AQ6UWV7 190 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 RBM43Q6ZSC3 357 aaKnown RBP2.8□□□□□ -1.96
SMAD4-207ENST00000589076 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 NUFIP2Q7Z417 695 aaKnown RBP2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SLC22A16Q86VW1 577 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SAMD12Q8N8I0 201 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 CNNM3Q8NE01 707 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 CHDHQ8NE62 594 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-207ENST00000589076 BEST4Q8NFU0 473 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 OR4F5Q8NH21 305 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 CHPT1Q8WUD6 406 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 FAM111AQ96PZ2 611 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 ACCSQ96QU6 501 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 VGLL1Q99990 258 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 HSD17B14Q9BPX1 270 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 C19orf43Q9BQ61 176 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SIRPDQ9H106 197 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 HEXA-AS1Q9H8Q6 139 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 CNOT2Q9NZN8 540 aaKnown RBP2.8□□□□□ -1.96
SMAD4-207ENST00000589076 EIF3KQ9UBQ5 218 aaKnown RBP2.8□□□□□ -1.96
SMAD4-207ENST00000589076 LHX3Q9UBR4 397 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 CIDEBQ9UHD4 219 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 MGAT4AQ9UM21 535 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SPATA2Q9UM82 520 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 NUDCQ9Y266 331 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 PLEKHA6Q9Y2H5 1048 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SLC6A5Q9Y345 797 aa2.8□□□□□ -1.96
SMAD4-207ENST00000589076 SALL1Q9NSC2 1324 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 A0A0A6YYD4 124 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 NPIPA5A0A0B4J1W7 369 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 TMEM89A2RUT3 159 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 NPIPA5E9PKD4 350 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 TXNL1O43396 289 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 DUSP11O75319 330 aaKnown RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 HPRP00739 348 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 PROS1P07225 676 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 FOSL2P15408 326 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ARF4P18085 180 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 TMOD1P28289 359 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 SPRP35270 261 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 MATKP42679 507 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 MAGEA4P43358 317 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 NPY2RP49146 381 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ATP4BP51164 291 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 GSTO1P78417 241 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ACY1Q03154 408 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 FCHO2Q0JRZ9 810 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 SNX1Q13596 522 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 BTG3Q14201 252 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 SIX1Q15475 284 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 INAQ16352 499 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 HKDC1Q2TB90 917 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF343Q6P1L6 599 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 PAQR6Q6TCH4 344 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 TMUB2Q71RG4 321 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ADGRD2Q7Z7M1 963 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ABHD12Q8N2K0 398 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 C4orf32Q8N8J7 132 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 MLKLQ8NB16 471 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ZNRF1Q8ND25 227 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ANKRD20A12PQ8NF67 263 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 PHYHIPQ92561 330 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF414Q96IQ9 312 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF597Q96LX8 424 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 KCNK16Q96T55 309 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 PSMB7Q99436 277 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 RAB11FIP5Q9BXF6 653 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 NMNAT2Q9BZQ4 307 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 LRRCC1Q9C099 1032 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 JPT2Q9H910 190 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 Q9HAA7 133 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 ELL3Q9HB65 397 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMAD4-207ENST00000589076 TP53TG3Q9ULZ0 132 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 FBXO7Q9Y3I1 522 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 CPQQ9Y646 472 aa2.79□□□□□ -1.96
SMAD4-207ENST00000589076 A0A1W2PPR1 153 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CFLARO15519 480 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 BUB1O43683 1085 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 STAM2O75886 525 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 TGFAP01135 160 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 OR9G9P0C7N8 305 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RALAP11233 206 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 CALML3P27482 149 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 PPP2R1BP30154 601 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 MAT2AP31153 395 aaKnown RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 AKT2P31751 481 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 RABIFP47224 123 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 BPIFB3P59826 476 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 MYBPC1Q00872 1141 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 ENPP2Q13822 863 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 SNAI3Q3KNW1 292 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 ANKRD55Q3KP44 614 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 AGKQ53H12 422 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 C9orf66Q5T8R8 295 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 WDR25Q64LD2 544 aaPredicted RBP2.78□□□□□ -1.96
SMAD4-207ENST00000589076 EMBQ6PCB8 327 aa2.78□□□□□ -1.96
SMAD4-207ENST00000589076 DPY19L2P2Q6ZN68 376 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms