RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MAPK12P53778 367 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
VMP1-206ENST00000587945 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
VMP1-206ENST00000587945 GGTA1PQ4G0N0 100 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 FAM111BQ6SJ93 734 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 PAGE2Q7Z2X7 111 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 COMMD6Q7Z4G1 85 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 SPPL2AQ8TCT8 520 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 ZNF483Q8TF39 744 aaPredicted RBP13.16□□□□□ -0.3
VMP1-206ENST00000587945 SELENOMQ8WWX9 145 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 ADIPOR1Q96A54 375 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 TP53INP1Q96A56 240 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 HBEGFQ99075 208 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 MRPL46Q9H2W6 279 aaKnown RBP13.16□□□□□ -0.3
VMP1-206ENST00000587945 ACKR4Q9NPB9 350 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 AHSPQ9NZD4 102 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 CES1P1Q9UKY3 287 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 PCDHA9Q9Y5H5 950 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 NPFFR2Q9Y5X5 522 aa13.16□□□□□ -0.3
VMP1-206ENST00000587945 CAPN14A8MX76 684 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.3
VMP1-206ENST00000587945 TP53I11O14683 189 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TRAPPC6AO75865 159 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 OTCP00480 354 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 HOXD4P09016 255 aaPredicted RBP13.15□□□□□ -0.3
VMP1-206ENST00000587945 DLX5P56178 289 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 DUSP2Q05923 314 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 DUSP8Q13202 625 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 SNTB1Q13884 538 aaKnown RBP13.15□□□□□ -0.3
VMP1-206ENST00000587945 RPS6KA2Q15349 733 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 NNATQ16517 81 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TCHHL1Q5QJ38 904 aaPredicted RBP13.15□□□□□ -0.3
VMP1-206ENST00000587945 TMEM198Q66K66 360 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 DESI1Q6ICB0 168 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 FAM180BQ6P0A1 224 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 WDR53Q7Z5U6 358 aaPredicted RBP13.15□□□□□ -0.3
VMP1-206ENST00000587945 ULK2Q8IYT8 1036 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 LIX1Q8N485 282 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 SIMC1Q8NDZ2 872 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TRPC4APQ8TEL6 797 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TM4SF18Q96CE8 201 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 ZNF597Q96LX8 424 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 RILPQ96NA2 401 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 GNRHR2Q96P88 292 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 BRINP2Q9C0B6 783 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 QPCTLQ9NXS2 382 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 ZNF180Q9UJW8 692 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 TACC2O95359 2948 aa13.15□□□□□ -0.3
VMP1-206ENST00000587945 A0A087WUV0 522 aaPredicted RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 C15orf38-AP3S2A0A0A6YYH1 394 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 ERAL1O75616 437 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 OR4F21O95013 312 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 SNRPAP09012 282 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 GABRA1P14867 456 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 GPX3P22352 226 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 CNTFP26441 200 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 ABCD3P28288 659 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 DEKP35659 375 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 HSD17B3P37058 310 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 WNT3P56703 355 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 NRG3P56975 720 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 MGAT2Q10469 447 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 MYBPHQ13203 477 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 EXOSC7Q15024 291 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 C10orf62Q5T681 223 aaPredicted RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 C6orf163Q5TEZ5 329 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 FNDC7Q5VTL7 733 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 ADCY4Q8NFM4 1077 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 OR7G1Q8NGA0 311 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 ZNF559Q9BR84 538 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 ANGPTL4Q9BY76 406 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 NXF5Q9H1B4 397 aaKnown RBP13.14□□□□□ -0.31
VMP1-206ENST00000587945 B4GALT7Q9UBV7 327 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 SLC6A5Q9Y345 797 aa13.14□□□□□ -0.31
VMP1-206ENST00000587945 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 C1orf226A1L170 272 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 ABCB1P08183 1280 aaPredicted RBP13.13□□□□□ -0.31
VMP1-206ENST00000587945 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CHN1P15882 459 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 GCAP28676 217 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 SOX18P35713 384 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CASP3P42574 277 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 MASP1P48740 699 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CDK9P50750 372 aaKnown RBP13.13□□□□□ -0.31
VMP1-206ENST00000587945 CLCQ05315 142 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TESK1Q15569 626 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms