RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	HNRNPH1	P31943	449 aa	Known RBP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	CDK9	P50750	372 aa	Known RBP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	DIO3	P55073	304 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	MTTP	P55157	894 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	LIM2	P55344	173 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	SLC18A2	Q05940	514 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	KRTAP1-1	Q07627	177 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	NHSL2	Q5HYW2	709 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	TRIM40	Q6P9F5	258 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	PAQR3	Q6TCH7	311 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	LYPD8	Q6UX82	237 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	TIFAB	Q6ZNK6	161 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	GBP7	Q8N8V2	638 aa	Predicted RBP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	ZNF441	Q8N8Z8	693 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	C9orf106	Q8NAJ2	232 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	OR10G3	Q8NGC4	313 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	ZNF721	Q8TF20	911 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	DCAKD	Q8WVC6	231 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	CCT6B	Q92526	530 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	QRFPR	Q96P65	431 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	PAFAH2	Q99487	392 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	PIGM	Q9H3S5	423 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	ZNF226	Q9NYT6	803 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	MOCS1	Q9NZB8	636 aa		13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	CNOT11	Q9UKZ1	510 aa	Known RBP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	RRP15	Q9Y3B9	282 aa	Known RBP	13.45	□□□□□ -0.26
RANBP3-208	ENST00000587263	ZCWPW2	A0A1B0GU75	182 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ANKRD33B	A6NCL7	494 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	LRIT2	A6NDA9	550 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	FAM159B	A6NKW6	160 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	DEFB108A	A8MXU0	73 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	GOLGA8M	H3BSY2	632 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	DYRK3	O43781	588 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	TRIM3	O75382	744 aa	Predicted RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ETHE1	O95571	254 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	GUCA1C	O95843	209 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	SNRPA	P09012	282 aa	Known RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ENO2	P09104	434 aa	Predicted RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	FBXO45	P0C2W1	286 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	CERS1	P27544	350 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	SSTR1	P30872	391 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	PLA2G16	P53816	162 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ILF2	Q12905	390 aa	Known RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	FOXF2	Q12947	444 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	THOC6	Q86W42	341 aa	Known RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ANKMY2	Q8IV38	441 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	C9orf40	Q8IXQ3	194 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	OR2L5	Q8NG80	312 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ZPLD1	Q8TCW7	415 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ACMSD	Q8TDX5	336 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	MZB1	Q8WU39	189 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	PIK3IP1	Q96FE7	263 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	WDYHV1	Q96HA8	205 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	ART5	Q96L15	291 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	NDN	Q99608	321 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	TM9SF2	Q99805	663 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	FAM167B	Q9BTA0	163 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	UGT2B28	Q9BY64	529 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	SLC6A5	Q9Y345	797 aa		13.44	□□□□□ -0.26
RANBP3-208	ENST00000587263	DOCK7	Q96N67	2140 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	SIAH2	O43255	324 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	LDB3	O75112	727 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	LRAT	O95237	230 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	CYP4B1	P13584	511 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	CPOX	P36551	454 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	IL2	P60568	153 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	EEF1A1	P68104	462 aa	Known RBP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	MPP2	Q14168	576 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	PDK4	Q16654	411 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	KCTD19	Q17RG1	926 aa	Predicted RBP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	EEF1A1P5	Q5VTE0	462 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	TMIGD1	Q6UXZ0	262 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	MEIOB	Q8N635	442 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	CDKL2	Q92772	493 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	DIO2	Q92813	273 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	ABTB1	Q969K4	478 aa	Predicted RBP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	SENP5	Q96HI0	755 aa	Predicted RBP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	REXO4	Q9GZR2	422 aa	Known RBP	13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	UBQLN3	Q9H347	655 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	PACSIN3	Q9UKS6	424 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	CHMP2B	Q9UQN3	213 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263	SLC22A14	Q9Y267	594 aa		13.43	□□□□□ -0.26
RANBP3-208	ENST00000587263		A8MXE2	369 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	TP53I11	O14683	189 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	SNX3	O60493	162 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	H2AFY	O75367	372 aa	Known RBP	13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	CLEC3A	O75596	197 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	RCBTB2	O95199	551 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	SNX4	O95219	450 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	IGKV3-11	P04433	115 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	TP53	P04637	393 aa	Predicted RBP	13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	GSTA1	P08263	222 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	VIM	P08670	466 aa	Known RBP	13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	PGAM1	P18669	254 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	CRYGS	P22914	178 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	GCK	P35557	465 aa		13.42	□□□□□ -0.26
RANBP3-208	ENST00000587263	MC3R	P41968	323 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms