RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SGCZQ96LD1 299 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 GPR137Q96N19 417 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-207ENST00000587256 KCNK9Q9NPC2 374 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 SACM1LQ9NTJ5 587 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 EHD3Q9NZN3 535 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 BCAP29Q9UHQ4 241 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 SLC5A6Q9Y289 635 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 TRAF6Q9Y4K3 522 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 POLEQ07864 2286 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 DOPEY2Q9Y3R5 2298 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 TM9SF1O15321 606 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 NADKO95544 446 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 HSPA4LO95757 839 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 P04436 131 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 LINC00032P0C843 101 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 PRPH2P23942 346 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 NR0B1P51843 470 aaKnown RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 NRG3P56975 720 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 MRPS35P82673 323 aaKnown RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 PLGLB1Q02325 96 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 EXOSC7Q15024 291 aaKnown RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 GALNTL6Q49A17 601 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 GK5Q6ZS86 529 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 RNF165Q6ZSG1 346 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 FAM47EQ6ZV65 393 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 TICAM1Q8IUC6 712 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 FAM9CQ8IZT9 166 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 SLC15A4Q8N697 577 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 OR2T11Q8NH01 316 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 C16orf52Q8NHV5 167 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 METTL2AQ96IZ6 378 aaKnown RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF681Q96N22 645 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 SLC35C2Q9NQQ7 365 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 DEPPQ9NTK1 212 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 ERRFI1Q9UJM3 462 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 CFL2Q9Y281 166 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 CCL27Q9Y4X3 112 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
ATG4D-207ENST00000587256 SPTAN1Q13813 2472 aaKnown RBP13.69□□□□□ -0.22
ATG4D-207ENST00000587256 TRGV8A0A0C4DH27 118 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 A0A0G2JMM0 328 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 A0A1W2PPB8 328 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 KIR3DP1A8MWS1 328 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ACOT7O00154 380 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 SKAP2O75563 359 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ZWINTO95229 277 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 FGF4P08620 206 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 FBXO45P0C2W1 286 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 CCL3P10147 92 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 PCSK2P16519 638 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 GPX3P22352 226 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 NTSP30990 170 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 TMED10P49755 219 aaKnown RBP13.68□□□□□ -0.22
ATG4D-207ENST00000587256 MAP4K2Q12851 820 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 CHI3L2Q15782 390 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 NNATQ16517 81 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 C4orf17Q53FE4 359 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 KRTCAP3Q53RY4 240 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 RNFT1Q5M7Z0 435 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 C1QL3Q5VWW1 255 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 FAM71E1Q6IPT2 247 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 SIAH3Q8IW03 269 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 DND1Q8IYX4 353 aaKnown RBP13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF615Q8N8J6 731 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF441Q8N8Z8 693 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ZFP62Q8NB50 900 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-207ENST00000587256 OR2M7Q8NG81 312 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 OR52R1Q8NGF1 315 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 OR5M3Q8NGP4 307 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 OR9A2Q8NGT5 310 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 CCT7Q99832 543 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 FAM173AQ9BQD7 235 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 ITPAQ9BY32 194 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 DTX4Q9Y2E6 619 aa13.68□□□□□ -0.22
ATG4D-207ENST00000587256 WBP11Q9Y2W2 641 aaKnown RBP13.68□□□□□ -0.22
ATG4D-207ENST00000587256 FAM166BA8MTA8 275 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 CAPN14A8MX76 684 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 LSM1O15116 133 aaKnown RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 BIRC5O15392 142 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 LRRTM2O43300 516 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 HS6ST1O60243 411 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 CDC40O60508 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 CBX7O95931 251 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 SERPINE1P05121 402 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 S1PR1P21453 382 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TACR1P25103 407 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ARRB2P32121 409 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 MPIP34949 423 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 DNASE1L1P49184 302 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms