RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 HHEXQ03014 270 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 RAPSNQ13702 412 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ELOCQ15369 112 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 CTU2Q2VPK5 515 aaKnown RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 COLEC12Q5KU26 742 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ATAD3BQ5T9A4 648 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 NIPAL1Q6NVV3 410 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 CLVS1Q8IUQ0 354 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 SLC44A2Q8IWA5 706 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 DEPDC4Q8N2C3 294 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 LRRC25Q8N386 305 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 PARP8Q8N3A8 854 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SMYD1Q8NB12 490 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 CADM4Q8NFZ8 388 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 APOBEC4Q8WW27 367 aaKnown RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 IPCEF1Q8WWN9 437 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 RAB8BQ92930 207 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 UCN3Q969E3 161 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 TMIGD2Q96BF3 282 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ELP4Q96EB1 424 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 HRASLS5Q96KN8 279 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 C10orf90Q96M02 699 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SLC6A18Q96N87 628 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 COL21A1Q96P44 957 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 PINK1Q9BXM7 581 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ACTRT3Q9BYD9 372 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 TCEAL2Q9H3H9 227 aaPredicted RBP10.61□□□□□ -0.71
LIG3-204ENST00000585740 SEMA6CQ9H3T2 930 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SERHL2Q9H4I8 314 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 LTB4R2Q9NPC1 389 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 ACER3Q9NUN7 267 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 NTMQ9P121 344 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 CA14Q9ULX7 337 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 DAPP1Q9UN19 280 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SLC9A8Q9Y2E8 581 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 NAALAD2Q9Y3Q0 740 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 SCN3AQ9NY46 2000 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 KMT2EQ8IZD2 1858 aa10.61□□□□□ -0.71
LIG3-204ENST00000585740 GLOD5A6NK44 160 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SYT5O00445 386 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 FAAHO00519 579 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 P2RX6O15547 441 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 CTSVO60911 334 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 PRKRAO75569 313 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 HMGN2P05204 90 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 TNFRSF1BP20333 461 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 CD38P28907 300 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 GGT2P36268 569 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 FEN1P39748 380 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 YAP1P46937 504 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 ID4P47928 161 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 PRKAG1P54619 331 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 LIM2P55344 173 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 STARD6P59095 220 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SKP1P63208 163 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 RPP38P78345 283 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 LASP1Q14847 261 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 RAB39AQ14964 217 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 UBXN2BQ14CS0 331 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 LAPTM4AQ15012 233 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 MAD2L1BPQ15013 274 aaPredicted RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 MAPK11Q15759 364 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SYPL1Q16563 259 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 DUSP7Q16829 419 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 RPS26P11Q5JNZ5 115 aaPredicted RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 TMEM107Q6UX40 140 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 USP53Q70EK8 1073 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 ERI1Q8IV48 349 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SLC5A8Q8N695 610 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 FAM46DQ8NEK8 389 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 GPR32P1Q8NGA4 272 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 ZCCHC10Q8TBK6 192 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 FKBP10Q96AY3 582 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 DHRS1Q96LJ7 313 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 NODALQ96S42 347 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 FEVQ99581 238 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 TREX2Q9BQ50 279 aaPredicted RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SYNPO2LQ9H987 977 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 CXorf21Q9HAI6 301 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 CACYBPQ9HB71 228 aaKnown RBP10.6□□□□□ -0.71
LIG3-204ENST00000585740 KCMF1Q9P0J7 381 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 PTGFRNQ9P2B2 879 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 WNT16Q9UBV4 365 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 POMT2Q9UKY4 750 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 MGAT4BQ9UQ53 548 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 PCDHGB1Q9Y5G3 927 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 SLC22A7Q9Y694 548 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 DMDP11532 3685 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 CEP192Q8TEP8 1941 aa10.6□□□□□ -0.71
LIG3-204ENST00000585740 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 A0A1W2PR77 199 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 BLACEA4D250 179 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 PRAMEF25A6NGN4 478 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms