RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 DPY30Q9C005 99 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 SH3BP4Q9P0V3 963 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 ERVK-19Q9WJR5 959 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 PCDHGA9Q9Y5G4 932 aaKnown RBP12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 CLCA3PQ9Y6N3 262 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 EML6Q6ZMW3 1958 aa12.39□□□□□ -0.43
CHAF1A-202ENST00000585371 MAST4O15021 2626 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 A6NL46 340 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 C9JVG2 144 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 PDPK1O15530 556 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 MAN1A2O60476 641 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 COX7A2P14406 83 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 IDO1P14902 403 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 PCSK2P16519 638 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 EFNA1P20827 205 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 SSTR4P31391 388 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 RPL3P39023 403 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 PGDP52209 483 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 NME5P56597 212 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 SLC37A1P57057 533 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 MRPS35P82673 323 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 SF3A3Q12874 501 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■■■■ 49.4
CHAF1A-202ENST00000585371 TRMT12Q53H54 448 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 B3GNTL1Q67FW5 361 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 JMJD6Q6NYC1 403 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 IGFL2Q6UWQ7 119 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 ZNF551Q7Z340 670 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 FUNDC1Q8IVP5 155 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 GALNT12Q8IXK2 581 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 OR8J2Q8NGG1 315 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 C9orf43Q8TAL5 461 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 KAT2AQ92830 837 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 SMAD5Q99717 465 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 BHLHE41Q9C0J9 482 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 ZBTB20Q9HC78 741 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 SIRT3Q9NTG7 399 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 ACSS1Q9NUB1 689 aaPredicted RBP12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 ZIM2Q9NZV7 527 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 KLHL14Q9P2G3 628 aa12.38□□□□□ -0.43
CHAF1A-202ENST00000585371 A0A0G2JND7 137 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 TRBV11-1A0A0K0K1C0 115 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 PLOD2O00469 737 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 IFI6P09912 130 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 TROVE2P10155 538 aaKnown RBP eCLIP12.37□□□□□ -0.439e-7■■■■■ 31
CHAF1A-202ENST00000585371 MPIP34949 423 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 CASRP41180 1078 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 CDK9P50750 372 aaKnown RBP12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 ATP4BP51164 291 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 CLCN2P51788 898 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 NCBP2P52298 156 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 GNGT1P63211 74 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 RAPSNQ13702 412 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 EXOSC7Q15024 291 aaKnown RBP12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 MLC1Q15049 377 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 CPTPQ5TA50 214 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 FAM9CQ8IZT9 166 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 VWA5B2Q8N398 1253 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 ZNF441Q8N8Z8 693 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 OR8K3Q8NH51 312 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 PSMA8Q8TAA3 256 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 ABHD17AQ96GS6 310 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 BBS4Q96RK4 519 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 CNPPD1Q9BV87 410 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 EPN3Q9H201 632 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 ANKRA2Q9H9E1 313 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 GIMAP4Q9NUV9 329 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 GPR83Q9NYM4 423 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 MAPRE3Q9UPY8 281 aa12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 COPG1Q9Y678 874 aaKnown RBP12.37□□□□□ -0.43
CHAF1A-202ENST00000585371 GMNCA6NCL1 334 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 PLOD3O60568 738 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 ZNF354AO60765 605 aaPredicted RBP12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 PSMG1O95456 288 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 NTSP30990 170 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 EMDP50402 254 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 DGKQP52824 942 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 ARFIP2P53365 341 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 AP2B1P63010 937 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 RNF4P78317 190 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 SRSF1Q07955 248 aaKnown RBP eCLIP12.36□□□□□ -0.437e-9■■■■■ 34.2
CHAF1A-202ENST00000585371 EBPQ15125 230 aaKnown RBP12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 PAOXQ6QHF9 649 aa12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 C16orf47Q6ZP98 133 aaPredicted RBP12.36□□□□□ -0.43
CHAF1A-202ENST00000585371 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms