RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 GLRA3O75311 464 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 KRT6AP02538 564 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 KRT6BP04259 564 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 IL3P08700 152 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 KRT6CP48668 564 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 BTKQ06187 659 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 MGAT2Q10469 447 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 CSTF3Q12996 717 aaKnown RBP16.58■□□□□ 0.24
SRSF1-208ENST00000584773 LCP2Q13094 533 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ZNF630Q2M218 657 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-208ENST00000584773 PRICKLE4Q2TBC4 344 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 DESI1Q6ICB0 168 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ARHGAP11AQ6P4F7 1023 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 XKRXQ6PP77 449 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ZYG11AQ6WRX3 759 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 FBXW8Q8N3Y1 598 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 FAM109AQ8N4B1 249 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 SLC15A4Q8N697 577 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ADIPOR1Q96A54 375 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 CNRIP1Q96F85 164 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-208ENST00000584773 EBPLQ9BY08 206 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ANKZF1Q9H8Y5 726 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 ANKRA2Q9H9E1 313 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 MID1IP1Q9NPA3 183 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 PNPLA3Q9NST1 481 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 MAT2BQ9NZL9 334 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 DCDC2Q9UHG0 476 aa16.58■□□□□ 0.24
SRSF1-208ENST00000584773 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 PCDH7O60245 1069 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 ULK1O75385 1050 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 NME6O75414 186 aaPredicted RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 ESRRBO95718 433 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 MYL2P10916 166 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 KRT15P19012 456 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 GPX3P22352 226 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 KCNJ2P63252 427 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 NTRK2Q16620 822 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 TRILQ7L0X0 811 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 SLC34A3Q8N130 599 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 C4orf33Q8N1A6 199 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 OR2W6PQ8NHA6 318 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 PHF10Q8WUB8 498 aaKnown RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 SDCCAG3Q96C92 435 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 JSRP1Q96MG2 331 aaPredicted RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 SMC6Q96SB8 1091 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 SHCBP1LQ9BZQ2 653 aa16.57■□□□□ 0.24
SRSF1-208ENST00000584773 NXF5Q9H1B4 397 aaKnown RBP16.57■□□□□ 0.24
SRSF1-208ENST00000584773 PHF3Q92576 2039 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 PLIN3O60664 434 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 CLDN14O95500 239 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 IGHG3P01860 377 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 HSD3B1P14060 373 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 ENDOUP21128 410 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 HSD3B2P26439 372 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 SERPINB3P29508 390 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 PKNOX1P55347 436 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 MRPS35P82673 323 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 HYAL4Q2M3T9 481 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 TRMT12Q53H54 448 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 C6orf163Q5TEZ5 329 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 HLA-DQA1Q5Y7H0 255 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 RGS9BPQ6ZS82 235 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 SRRM1Q8IYB3 904 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 TAGAPQ8N103 731 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 VWA5B2Q8N398 1253 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 ZNF681Q96N22 645 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 ITPAQ9BY32 194 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 ZNF703Q9H7S9 590 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-208ENST00000584773 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 SPRR3Q9UBC9 169 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 BCAP29Q9UHQ4 241 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 MCM8Q9UJA3 840 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 UTS2RQ9UKP6 389 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 DLGAP4Q9Y2H0 992 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 NPFFR2Q9Y5X5 522 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 FBN2P35556 2912 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 ABCA12Q86UK0 2595 aa16.56■□□□□ 0.24
SRSF1-208ENST00000584773 GOLGA6L10A6NI86 522 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 GUCY1B2O75343 617 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 CBX7O95931 251 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 ATP1B1P05026 303 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 ENO1P06733 434 aaKnown RBP16.55■□□□□ 0.24
SRSF1-208ENST00000584773 PCSK2P16519 638 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 CSNK2A2P19784 350 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-208ENST00000584773 AGAP20933 346 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 KIR3DL1P43629 444 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 NAGLUP54802 743 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 PRSS53Q2L4Q9 553 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 ZNF585AQ6P3V2 769 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 TDRPQ86YL5 185 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 MCEMP1Q8IX19 187 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 OR52R1Q8NGF1 315 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 C16orf78Q8WTQ4 265 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 DIO2Q92813 273 aa16.55■□□□□ 0.24
SRSF1-208ENST00000584773 EXOSC8Q96B26 276 aaKnown RBP16.55■□□□□ 0.24
SRSF1-208ENST00000584773 DOHHQ9BU89 302 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms