RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DNASE1L1P49184 302 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 PCLAFQ15004 111 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 ERCC6LQ2NKX8 1250 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 CMPK2Q5EBM0 449 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 FAM111BQ6SJ93 734 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 LYPD8Q6UX82 237 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 RGS9BPQ6ZS82 235 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 SLC22A16Q86VW1 577 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 DND1Q8IYX4 353 aaKnown RBP18.84■□□□□ 0.61
SS18-224ENST00000584083 ZNF615Q8N8J6 731 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 BANPQ8N9N5 519 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 ADCY4Q8NFM4 1077 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 OR52N2Q8NGI0 321 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 OR5M3Q8NGP4 307 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 CDC26Q8NHZ8 85 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 TP53INP1Q96A56 240 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 CNRIP1Q96F85 164 aaPredicted RBP18.84■□□□□ 0.61
SS18-224ENST00000584083 CCDC120Q96HB5 630 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 TTTY12Q9BZ98 90 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 RYDENQ9NUL5 291 aaKnown RBP18.84■□□□□ 0.61
SS18-224ENST00000584083 MKS1Q9NXB0 559 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 DNAJC13O75165 2243 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 A0A1B0GTH9 108 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 CAPN14A8MX76 684 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 PRRG2O14669 202 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 TRIM13O60858 407 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 SPAG7O75391 227 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 UROSP10746 265 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 PTGS2P35354 604 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 PIGAP37287 484 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 MAP4K2Q12851 820 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 HEPACAMQ14CZ8 416 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 PRICKLE4Q2TBC4 344 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 GALNT18Q6P9A2 607 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 PAOXQ6QHF9 649 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 TMEM64Q6YI46 380 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 LRRC25Q8N386 305 aaPredicted RBP18.83■□□□□ 0.6
SS18-224ENST00000584083 OR10G3Q8NGC4 313 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 EXOSC8Q96B26 276 aaKnown RBP18.83■□□□□ 0.6
SS18-224ENST00000584083 GATA5Q9BWX5 397 aaPredicted RBP18.83■□□□□ 0.6
SS18-224ENST00000584083 PARD6BQ9BYG5 372 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 TNFRSF12AQ9NP84 129 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.6
SS18-224ENST00000584083 MAT2BQ9NZL9 334 aa18.83■□□□□ 0.6
SS18-224ENST00000584083 S1PR1P21453 382 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 NRG3P56975 720 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 KCNJ2P63252 427 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 DUSP2Q05923 314 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 EXOSC7Q15024 291 aaKnown RBP18.82■□□□□ 0.6
SS18-224ENST00000584083 LTB4RQ15722 352 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 PRAMEF20Q5VT98 475 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 CLEC6AQ6EIG7 209 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 TRIM46Q7Z4K8 759 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 FGD2Q7Z6J4 655 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 CHERPQ8IWX8 916 aaKnown RBP18.82■□□□□ 0.6
SS18-224ENST00000584083 ZNF441Q8N8Z8 693 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 PAQR8Q8TEZ7 354 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 ZNF681Q96N22 645 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 FAM111AQ96PZ2 611 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 SMC6Q96SB8 1091 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 IL1RL2Q9HB29 575 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 GIMAP4Q9NUV9 329 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 TUBA8Q9NY65 449 aaPredicted RBP18.82■□□□□ 0.6
SS18-224ENST00000584083 CNIH4Q9P003 139 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 CFL2Q9Y281 166 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 FIS1Q9Y3D6 152 aa18.82■□□□□ 0.6
SS18-224ENST00000584083 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.82■□□□□ 0.6
SS18-224ENST00000584083 GLSO94925 669 aaPredicted RBP18.81■□□□□ 0.6
SS18-224ENST00000584083 TPOP07202 933 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 ALDH3A1P30838 453 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 GSTM5P46439 218 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 ZNF763Q0D2J5 394 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 C2orf80Q0P641 193 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 MGAT2Q10469 447 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 NTRK2Q16620 822 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 ARHGAP11AQ6P4F7 1023 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 RPTNQ6XPR3 784 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 MRGPRGQ86SM5 289 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 DOLPP1Q86YN1 238 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 CCDC116Q8IYX3 515 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 SAMD14Q8IZD0 417 aaPredicted RBP18.81■□□□□ 0.6
SS18-224ENST00000584083 FBXW8Q8N3Y1 598 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 ITLN2Q8WWU7 325 aaPredicted RBP18.81■□□□□ 0.6
SS18-224ENST00000584083 ADIPOR1Q96A54 375 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 C11orf24Q96F05 449 aaPredicted RBP18.81■□□□□ 0.6
SS18-224ENST00000584083 TRMOQ9BU70 441 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 SH2D2AQ9NP31 389 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 SIRT5Q9NXA8 310 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 SLC17A7Q9P2U7 560 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 ENTPD4Q9Y227 616 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 MEMO1Q9Y316 297 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 NPFFR2Q9Y5X5 522 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 EXPH5Q8NEV8 1989 aa18.81■□□□□ 0.6
SS18-224ENST00000584083 TP53I11O14683 189 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 AZIN1O14977 448 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 RSL1D1O76021 490 aaKnown RBP18.8■□□□□ 0.6
SS18-224ENST00000584083 LRATO95237 230 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 GPX3P22352 226 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 MAGEA5P43359 124 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 TMED10P49755 219 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms