RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PGFP49763 221 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 RAG2P55895 527 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC8A3P57103 927 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 CCDC40Q4G0X9 1142 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 HERC4Q5GLZ8 1057 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 LIPKQ5VXJ0 399 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 REP15Q6BDI9 236 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 RHBDD2Q6NTF9 364 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 YRDCQ86U90 279 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 LRRC49Q8IUZ0 686 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 LRRC17Q8N6Y2 441 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 ZNF491Q8N8L2 437 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 ITLN1Q8WWA0 313 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 PHYHIPQ92561 330 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 TMEM45BQ96B21 275 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 PSMB7Q99436 277 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 SPXQ9BT56 116 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 NLNQ9BYT8 704 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 TNMDQ9H2S6 317 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 PNNQ9H307 717 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 ADGRL4Q9HBW9 690 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 NRN1Q9NPD7 142 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 HOMER3Q9NSC5 361 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 RCOR3Q9P2K3 495 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 TUBGCP4Q9UGJ1 667 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC9A8Q9Y2E8 581 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 MRPL11Q9Y3B7 192 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 CSAG2Q9Y5P2 127 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 RAD54L2Q9Y4B4 1467 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 HCFC1P51610 2035 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 MCF2LO15068 1137 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 HPP00738 406 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 ZCCHC18P0CG32 403 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 UCP1P25874 307 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 AKT2P31751 481 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 ABRAXAS2Q15018 415 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC1A5Q15758 541 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CDC37Q16543 378 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 ANKRD55Q3KP44 614 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 NHLRC3Q5JS37 347 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CWC27Q6UX04 472 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 MFSD7Q6UXD7 560 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 PYROXD2Q8N2H3 581 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CHCHD4Q8N4Q1 142 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 NSMCE2Q96MF7 247 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CBWD1Q9BRT8 395 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 SPASTQ9UBP0 616 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 LHX3Q9UBR4 397 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CLIP2Q9UDT6 1046 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 CCPG1Q9ULG6 757 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 ATG4BQ9Y4P1 393 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 FAM205AQ6ZU69 1335 aa4.41□□□□□ -1.7
SMARCE1-219ENST00000583294 GPRASP1Q5JY77 1395 aa4.4□□□□□ -1.7
SMARCE1-219ENST00000583294 FOXI3A8MTJ6 420 aaPredicted RBP4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 CFLARO15519 480 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 LRRTM2O43300 516 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 SH3BGRLO75368 114 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 VENTXO95231 258 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 MT-ATP6P00846 226 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 MELTFP08582 738 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 ETS1P14921 441 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 ACP1P24666 158 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 TMOD1P28289 359 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 PRDX6P30041 224 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 MAT2AP31153 395 aaKnown RBP4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 HMGCLP35914 325 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 TAF6P49848 677 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 SLC7A2P52569 658 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 DSCR10P59022 87 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 CRMP1Q14194 572 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 ZKSCAN8Q15776 578 aaPredicted RBP4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 HAGHQ16775 308 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 AGKQ53H12 422 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 ABRAXAS1Q6UWZ7 409 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 APOOLQ6UXV4 268 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 MLKLQ8NB16 471 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 SUMF1Q8NBK3 374 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 OR8H1Q8NGG4 311 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 BIRC7Q96CA5 298 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 NTNG2Q96CW9 530 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 RBM18Q96H35 190 aaKnown RBP4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 RPP25Q9BUL9 199 aaKnown RBP4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 NACA2Q9H009 215 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 RPS10P5Q9NQ39 176 aa4.4□□□□□ -1.71
SMARCE1-219ENST00000583294 PTPRUQ92729 1446 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 KRT87PA6NCN2 255 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 CYB561D2O14569 222 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 CXCL10P02778 98 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 CYP11B1P15538 503 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 GAP43P17677 238 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 MATKP42679 507 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 LMO4P61968 165 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 NME3Q13232 169 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 CNPY1Q3B7I2 92 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 ZNF528Q3MIS6 628 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 EIPR1Q53HC9 387 aa4.39□□□□□ -1.71
SMARCE1-219ENST00000583294 FAM219BQ5XKK7 198 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms