RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SERPINB6	P35237	376 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	AHR	P35869	848 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	NDST2	P52849	883 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RBPJ	Q06330	500 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	NME3	Q13232	169 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	DPYS	Q14117	519 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	KRT33B	Q14525	404 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RFTN1	Q14699	578 aa	Predicted RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SLMAP	Q14BN4	828 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF528	Q3MIS6	628 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	PARP15	Q460N3	678 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	C2CD6	Q53TS8	623 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ODF2	Q5BJF6	829 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SIRPB2	Q5JXA9	342 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OTUD3	Q5T2D3	398 aa	Predicted RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RNASEH2B	Q5TBB1	312 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM72A	Q5TYM5	149 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ZDHHC20	Q5W0Z9	365 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM72D	Q6L9T8	149 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FBXL22	Q6P050	247 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	PPP1R21	Q6ZMI0	780 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OTOA	Q7RTW8	1153 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TRMT11	Q7Z4G4	463 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ABI3BP	Q7Z7G0	1075 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	NLRP14	Q86W24	1093 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM72B	Q86X60	149 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM131B	Q86XD5	332 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TMEM25	Q86YD3	366 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	KATNAL2	Q8IYT4	538 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	CCDC185	Q8N715	623 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RTL3	Q8N8U3	475 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	NAT8L	Q8N9F0	302 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	DCAF4L2	Q8NA75	395 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SPC24	Q8NBT2	197 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC24A4	Q8NFF2	622 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TRIM58	Q8NG06	486 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	EXD1	Q8NHP7	514 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	LRRC8C	Q8TDW0	803 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	UTP15	Q8TED0	518 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC44A1	Q8WWI5	657 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ROBO4	Q8WZ75	1007 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM3C	Q92520	227 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	EXT2	Q93063	718 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	WBP2	Q969T9	261 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ISG20	Q96AZ6	181 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TBC1D31	Q96DN5	1066 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ALG14	Q96F25	216 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	LINGO1	Q96FE5	620 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RBM41	Q96IZ5	413 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF599	Q96NL3	588 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RPRD1A	Q96P16	312 aa	Predicted RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ALS2CR12	Q96Q35	445 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	INTS14	Q96SY0	518 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	GABRG3	Q99928	467 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	P2RY13	Q9BPV8	354 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SNRNP25	Q9BV90	132 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	BBS2	Q9BXC9	721 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TRIM7	Q9C029	511 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ZYG11B	Q9C0D3	744 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	WNT5B	Q9H1J7	359 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	LINC00597	Q9H2U6	94 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TBC1D17	Q9HA65	648 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM118A	Q9NWS6	357 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	GTSE1	Q9NYZ3	720 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TAAR2	Q9P1P5	351 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	MDFIC	Q9P1T7	246 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	RHCG	Q9UBD6	479 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OR12D3	Q9UGF7	316 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	MUTYH	Q9UIF7	546 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	LIPT1	Q9Y234	373 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TCF19	Q9Y242	345 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	HS3ST2	Q9Y278	367 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OR51B4	Q9Y5P0	310 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	PATJ	Q8NI35	1801 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	LAMA2	P24043	3122 aa	Known RBP	2.9	□□□□□ -1.94
MSI2-215	ENST00000582453	CUL9	Q8IWT3	2517 aa		2.9	□□□□□ -1.94
MSI2-215	ENST00000582453	ATG2A	Q2TAZ0	1938 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	BRWD1	Q9NSI6	2320 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	IGLV5-45	A0A087WSX0	123 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453		A0A0U1RQK1	487 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF320	A2RRD8	509 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	HTR3E	A5X5Y0	456 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ANKRD66	B4E2M5	251 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	NEDD8-MDP1	E9PL57	170 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453		K7EQS6	105 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453		M0R296	226 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	EEF2K	O00418	725 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PLK4	O00444	970 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SLC30A4	O14863	429 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ALOX15B	O15296	676 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	BUD23	O43709	281 aa	Known RBP	2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SYNGR3	O43761	229 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SPOP	O43791	374 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	SOCS5	O75159	536 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	ZMPSTE24	O75844	475 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	PDE9A	O76083	593 aa		2.9	□□□□□ -1.95
MSI2-215	ENST00000582453	MOCS3	O95396	460 aa		2.9	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms