RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PPIEQ9UNP9 301 aaKnown RBP14.48□□□□□ -0.09
SS18-216ENST00000580751 TLN1Q9Y490 2541 aaKnown RBP14.48□□□□□ -0.09
SS18-216ENST00000580751 NBEAQ8NFP9 2946 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 PRSS51A0A1B0GVH4 220 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 GABRR3A8MPY1 467 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 A8MUA0 341 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 RNASET2O00584 256 aaKnown RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 MRASO14807 208 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 GYG2O15488 501 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 ERN1O75460 977 aaKnown RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 DNAJB5O75953 348 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 ATP1B1P05026 303 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 PORP16435 677 aaPredicted RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 CAPN3P20807 821 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 TRPC1P48995 793 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 POLE2P56282 527 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 NCALDP61601 193 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 MAPKAPK3Q16644 382 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 SPRED3Q2MJR0 410 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 VPS26BQ4G0F5 336 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 SPANXN4Q5MJ08 99 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 C6orf163Q5TEZ5 329 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 REP15Q6BDI9 236 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 JMJD6Q6NYC1 403 aaPredicted RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 ASRGL1Q7L266 308 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 LRRC25Q8N386 305 aaPredicted RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 POU5F2Q8N7G0 328 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 MORN4Q8NDC4 146 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 B3GNT7Q8NFL0 401 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 PTPMT1Q8WUK0 201 aaPredicted RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 TTC9Q92623 222 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 CNRIP1Q96F85 164 aaPredicted RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 ITCHQ96J02 903 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 ART5Q96L15 291 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 OR52E6Q96RD3 313 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 DUSP26Q9BV47 211 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 LHPPQ9H008 270 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 MMP25Q9NPA2 562 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 TAS2R1Q9NYW7 299 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 BTNL2Q9UIR0 455 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 EXO1Q9UQ84 846 aaKnown RBP14.47□□□□□ -0.09
SS18-216ENST00000580751 AP3M1Q9Y2T2 418 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 IGSF10Q6WRI0 2623 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 MED13Q9UHV7 2174 aa14.47□□□□□ -0.09
SS18-216ENST00000580751 SPTA1P02549 2419 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 ATMQ13315 3056 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 C15orf38-AP3S2A0A0A6YYH1 394 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 MYOCOSA0A1B0GUC4 107 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 CFAP73A6NFT4 308 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 MKRN2OSH3BPM6 223 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 ERVH48-1M5A8F1 160 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 FBP2O00757 339 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 AIM2O14862 343 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 AKAP10O43572 662 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 CEACAM4O75871 244 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 LRATO95237 230 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 NTSP30990 170 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 CPOXP36551 454 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 FEN1P39748 380 aaKnown RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 CCL11P51671 97 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 Q0VFX4 171 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 MYBPC3Q14896 1274 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 MLC1Q15049 377 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 CEBPEQ15744 281 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 TRMT5Q32P41 509 aaKnown RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 TIGD2Q4W5G0 525 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 ARPINQ7Z6K5 226 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 GALNT12Q8IXK2 581 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 PGAM4Q8N0Y7 254 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 NFAM1Q8NET5 270 aaPredicted RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 RIT1Q92963 219 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 PPWD1Q96BP3 646 aaKnown RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 RCN3Q96D15 328 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 VMP1Q96GC9 406 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 THOC3Q96J01 351 aaKnown RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 ZNF681Q96N22 645 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 BBS4Q96RK4 519 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 ADNPQ9H2P0 1102 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 ACSS1Q9NUB1 689 aaPredicted RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 GPR83Q9NYM4 423 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 COPS7AQ9UBW8 275 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 TUBD1Q9UJT1 453 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 PRPF19Q9UMS4 504 aaKnown RBP14.46□□□□□ -0.09
SS18-216ENST00000580751 LHX6Q9UPM6 363 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 GMEB1Q9Y692 573 aa14.46□□□□□ -0.09
SS18-216ENST00000580751 A0A1W2PS29 197 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 MASP2O00187 686 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 DNAJC8O75937 253 aaPredicted RBP14.45□□□□□ -0.1
SS18-216ENST00000580751 ALPPP05187 535 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 NT5EP21589 574 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 MPIP34949 423 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 FRKP42685 505 aaPredicted RBP14.45□□□□□ -0.1
SS18-216ENST00000580751 NUDT2P50583 147 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 CLCN2P51788 898 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 PGDP52209 483 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 MXRA7P84157 204 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 ZNF750Q32MQ0 723 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 PGS1Q32NB8 556 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 LRIF1Q5T3J3 769 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms