RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 MECRQ9BV79 373 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 WWTR1Q9GZV5 400 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 OR10A5Q9H207 317 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 EML4Q9HC35 981 aaKnown RBP12.91□□□□□ -0.34
GGA3-203ENST00000577435 SH2D2AQ9NP31 389 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 MAT2BQ9NZL9 334 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 ERRFI1Q9UJM3 462 aaPredicted RBP12.91□□□□□ -0.34
GGA3-203ENST00000577435 UTS2RQ9UKP6 389 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 OSGIN2Q9Y236 505 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 DNAJC15Q9Y5T4 150 aa12.91□□□□□ -0.34
GGA3-203ENST00000577435 A0A1B0GUH1 482 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 RGS14O43566 566 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 ASNA1O43681 348 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 UNC5CO95185 931 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 CHEK2O96017 543 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 LDLRP01130 860 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 FBXO45P0C2W1 286 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 NEFHP12036 1026 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 DDCP20711 480 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 KCNK10P57789 538 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 SRSF11Q05519 484 aaKnown RBP12.9□□□□□ -0.34
GGA3-203ENST00000577435 DUSP2Q05923 314 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 FAM71E1Q6IPT2 247 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 NOXRED1Q6NXP6 359 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 FAM111BQ6SJ93 734 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 TAGAPQ8N103 731 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 LRRC25Q8N386 305 aaPredicted RBP12.9□□□□□ -0.34
GGA3-203ENST00000577435 VWA5B2Q8N398 1253 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 SPACA9Q96E40 222 aaPredicted RBP12.9□□□□□ -0.34
GGA3-203ENST00000577435 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 MYNNQ9NPC7 610 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 SLC35C2Q9NQQ7 365 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 C1orf109Q9NX04 203 aa12.9□□□□□ -0.34
GGA3-203ENST00000577435 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
GGA3-203ENST00000577435 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 TM9SF1O15321 606 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 BIRC5O15392 142 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 SEC22BO75396 215 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 ERLIN1O75477 346 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 CHRNGP07510 517 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 DHRS4L1P0CG22 281 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 ZNF24P17028 368 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 RBPJQ06330 500 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 C2orf80Q0P641 193 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
GGA3-203ENST00000577435 HLA-DQA1Q5Y7H0 255 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 SLC22A10Q63ZE4 541 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 IKBIPQ70UQ0 350 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 CCDC116Q8IYX3 515 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 PAQR8Q8TEZ7 354 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 EBPLQ9BY08 206 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 LRTM1Q9HBL6 345 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 SACM1LQ9NTJ5 587 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 FREM3P0C091 2139 aa12.89□□□□□ -0.35
GGA3-203ENST00000577435 MYO1GB0I1T2 1018 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 LRRTM2O43300 516 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 CBX7O95931 251 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 NAGAP17050 411 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 GPX3P22352 226 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 ARRB2P32121 409 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 MPIP34949 423 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 SERPINB4P48594 390 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 NR0B1P51843 470 aaKnown RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 DCAF7P61962 342 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 NTRK2Q16620 822 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 HYAL4Q2M3T9 481 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 ZNF628Q5EBL2 1059 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 FAM180BQ6P0A1 224 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 Q6ZPB1 254 aaPredicted RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 ZCCHC23Q6ZST2 131 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 GHDCQ8N2G8 530 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 ADCY4Q8NFM4 1077 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 EXOSC8Q96B26 276 aaKnown RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 ZNF764Q96H86 408 aaPredicted RBP12.88□□□□□ -0.35
GGA3-203ENST00000577435 CCT7Q99832 543 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 BRINP2Q9C0B6 783 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 CNIH4Q9P003 139 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 PRODH2Q9UF12 536 aa12.88□□□□□ -0.35
GGA3-203ENST00000577435 EXO1Q9UQ84 846 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms