RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 COMMD3Q9UBI1 195 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 CAMK2AQ9UQM7 478 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 FABP12A6NFH5 140 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 TNFRSF11BO00300 401 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 RFPL3O75679 317 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 LSM8O95777 96 aaKnown RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 ICAM1P05362 532 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 CSNK2A2P19784 350 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 KITLGP21583 273 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 CD72P21854 359 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 CORO1AP31146 461 aaKnown RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 ATP6AP1Q15904 470 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 GLYATQ6IB77 296 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 MOB2Q70IA6 237 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 C16orf78Q8WTQ4 265 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 SLC39A7Q92504 469 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 DEFB126Q9BYW3 111 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 OR8D2Q9GZM6 311 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 PITHD1Q9GZP4 211 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 C2orf42Q9NWW7 574 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 PPP4R1LQ9P1A2 415 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 NWD1Q149M9 1564 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 SREBF1P36956 1147 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 BIDP55957 195 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 FGFBP1Q14512 234 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 COL28A1Q2UY09 1125 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 KIAA1161Q6NSJ0 714 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 EPGNQ6UW88 154 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 ZBED6CLQ96FA7 236 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 PGAM5Q96HS1 289 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 C11orf84Q9BUA3 381 aaPredicted RBP8.5□□□□□ -1.05
CDH8-203ENST00000577390 BTBD1Q9H0C5 482 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
CDH8-203ENST00000577390 VEGFCP49767 419 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 HOXA4Q00056 320 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 KRBOX4Q5JUW0 171 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 SPPL2CQ8IUH8 684 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 LNX1Q8TBB1 728 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 SLC35G5Q96KT7 338 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 ZBTB26Q9HCK0 441 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TAS2R3Q9NYW6 316 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 RIMS3Q9UJD0 308 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 YIPF1Q9Y548 306 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 M0QZ24 198 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 MAN2B1O00754 1011 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 HPRP00739 348 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 CCND3P30281 292 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 CLRN3Q8NCR9 226 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 LPGAT1Q92604 370 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 MRPL45Q9BRJ2 306 aaKnown RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 MAN2B2Q9Y2E5 1009 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 ERCC6L2Q5T890 1561 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 A0A1W2PQ67 120 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TCRBV7S2A1N4TA0A589 114 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 SYN3O14994 580 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 HCRTR2O43614 444 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 MTX2O75431 263 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 SOX30O94993 753 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 GOSR1O95249 250 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 SGPL1O95470 568 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 HOXC6P09630 235 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 PPP2CBP62714 309 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TMEM220Q6QAJ8 160 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 OR9A4Q8NGU2 314 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 FAM151AQ8WW52 585 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 HOXB13Q92826 284 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 FAM84AQ96KN4 292 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 DPCDQ9BVM2 203 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 FOLH1BQ9HBA9 442 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 EFCAB7A8K855 629 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 SOCS2O14508 198 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 YIF1AO95070 293 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 ACRP10323 421 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TFEBP19484 476 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 CAP2P40123 477 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 CHRNA4P43681 627 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 POU3F4P49335 361 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 MC2RQ01718 297 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 DLX2Q07687 328 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 DUSP6Q16828 381 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TMEM173Q86WV6 379 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 DEFB106AQ8N104 65 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 TMEM104Q8NE00 496 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 APOLD1Q96LR9 279 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 VRK1Q99986 396 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 OLAHQ9NV23 265 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 MRC1P22897 1456 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 A0A0B4J203 849 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 GJE1A6NN92 205 aa8.49□□□□□ -1.05
CDH8-203ENST00000577390 ANXA4P09525 319 aaPredicted RBP8.49□□□□□ -1.05
CDH8-203ENST00000577390 ZP3P21754 424 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms