RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PLEKHA6Q9Y2H5 1048 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 KIAA1217Q5T5P2 1943 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GREB1LQ9C091 1923 aaPredicted RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 KIF7Q2M1P5 1343 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 NPIPA5A0A0B4J1W7 369 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TMEM89A2RUT3 159 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 OR5H15A6NDH6 313 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 GLTPD2A6NH11 291 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 A8MU76 341 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 MEI4A8MW99 385 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 EPM2AB3EWF7 344 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NPIPA5E9PKD4 350 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NEDD8-MDP1E9PL57 170 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CFLARO15519 480 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 B4GAT1O43505 415 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NME2P1O60361 137 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TSPAN2O60636 221 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 SH3BGRLO75368 114 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 FHP07954 510 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TPBGLP0DKB5 382 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 HSPA5P11021 654 aaKnown RBP2.07□□□□□ -2.08
COPS3-213ENST00000577210 HSD17B1P14061 328 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CD1DP15813 335 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 GLRA1P23415 457 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CYP2F1P24903 491 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 DNAJB1P25685 340 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 SLC1A4P43007 532 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NUCB2P80303 420 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 IL9RQ01113 521 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ACY1Q03154 408 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NME3Q13232 169 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 EMC2Q15006 297 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TEX35Q5T0J7 233 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 SULT1C3Q6IMI6 304 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ABRAXAS1Q6UWZ7 409 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ZNF841Q6ZN19 808 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ARMCX2Q7L311 632 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ERASQ7Z444 233 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 BNIPLQ7Z465 357 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 LCA5Q86VQ0 697 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 P2RY8Q86VZ1 359 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ABHD12Q8N2K0 398 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ZNF781Q8N8C0 355 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 C17orf47Q8NEP4 570 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 OR4L1Q8NH43 312 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 FAM222BQ8WU58 562 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CHPT1Q8WUD6 406 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 N4BP2L2Q92802 583 aaPredicted RBP2.07□□□□□ -2.08
COPS3-213ENST00000577210 TAF15Q92804 592 aaKnown RBP eCLIP2.07□□□□□ -2.08
COPS3-213ENST00000577210 PNPLA2Q96AD5 504 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 MRPL53Q96EL3 112 aaKnown RBP2.07□□□□□ -2.08
COPS3-213ENST00000577210 DTNBP1Q96EV8 351 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TTC25Q96NG3 672 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 RCHY1Q96PM5 261 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 AGPAT1Q99943 283 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 HSD17B14Q9BPX1 270 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 PYGO2Q9BRQ0 406 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 RAB11FIP5Q9BXF6 653 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 CCSER1Q9C0I3 900 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ATG10Q9H0Y0 220 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 SIRPDQ9H106 197 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 SLC26A1Q9H2B4 701 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 PLEKHA3Q9HB20 300 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 YAE1D1Q9NRH1 226 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TUBGCP4Q9UGJ1 667 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 NIP7Q9Y221 180 aaKnown RBP eCLIP2.07□□□□□ -2.08
COPS3-213ENST00000577210 ENTPD4Q9Y227 616 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ATG4BQ9Y4P1 393 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 ABCC4O15439 1325 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 UBE4BO95155 1302 aa2.07□□□□□ -2.08
COPS3-213ENST00000577210 TCF20Q9UGU0 1960 aaKnown RBP2.07□□□□□ -2.08
COPS3-213ENST00000577210 IGKV3D-20A0A0C4DH25 116 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ACOD1A6NK06 481 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TRIM64CA6NLI5 447 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 G3V2L1 256 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ADAM12O43184 909 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 BUB1O43683 1085 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 FRAT2O75474 233 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 ANXA9O76027 345 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 NUDT14O95848 222 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TXNDC12O95881 172 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 HPP00738 406 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 MT-ND1P03886 318 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 FCER2P06734 321 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 PDHBP11177 359 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ZNF10P21506 573 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 PAICSP22234 425 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 GPX3P22352 226 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 SHC1P29353 583 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 OR1D2P34982 312 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 MDH1P40925 334 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 ACADSBP45954 432 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 BRCC3P46736 316 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 NDST1P52848 882 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ARFIP1P53367 373 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 NDUFV3P56181 108 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 NLRP11P59045 1033 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 ELP6Q0PNE2 266 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TAF7Q15545 349 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms