RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RFLNBQ8N5W9 214 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 UBL4BQ8N7F7 174 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 SMAP2Q8WU79 429 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 ALG3Q92685 438 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PMM1Q92871 262 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 FBXL8Q96CD0 374 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PELOQ9BRX2 385 aaKnown RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 TMEM204Q9BSN7 226 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 OSBPL11Q9BXB4 747 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 FRMD8P1Q9BZ68 369 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 ESRP2Q9H6T0 727 aaKnown RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 ACTR8Q9H981 624 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 L2HGDHQ9H9P8 463 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 LYRM4Q9HD34 91 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 FBXO6Q9NRD1 293 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 FAIMQ9NVQ4 179 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 TAS2R13Q9NYV9 303 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 MED16Q9Y2X0 877 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 RNF115Q9Y4L5 304 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 MAGED1Q9Y5V3 778 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 IGHV4-30-2A0A087WSY4 118 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 C2orf92A0A1B0GVN3 265 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FAM234BA2RU67 622 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CTAGE15A4D2H0 777 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 LRIT2A6NDA9 550 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FRG2CA6NGY1 282 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ANKDD1BA6NHY2 528 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 EMC8O43402 210 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 KLF4O43474 513 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 LIASO43766 372 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SSX4O60224 188 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FGF17O60258 216 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 OR10H2O60403 315 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 H2AFYO75367 372 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 CLEC3AO75596 197 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CBR3O75828 277 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 GUCA1CO95843 209 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TGM6O95932 706 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FTCDO95954 541 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SOD3P08294 240 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 DANCRP0C864 163 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FCGR2AP12318 317 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SLC25A16P16260 332 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ZNF708P17019 499 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TCP1P17987 556 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 GNAZP19086 355 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CPN2P22792 545 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 IGFBP5P24593 272 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 DPP4P27487 766 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 GMPRP36959 345 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SLC1A2P43004 574 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 GZMKP49863 264 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 LHX2P50458 406 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 GNG11P61952 73 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 RPS13P62277 151 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 HERVK_113P63132 956 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ERVK-8P63133 956 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FAPQ12884 760 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 DHX34Q14147 1143 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 SLBPQ14493 270 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMG6-219ENST00000575663 EXOC3L2Q2M3D2 409 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SPRED3Q2MJR0 410 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 FAM166AQ6J272 317 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ADAM5Q6NVV9 412 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ZNF549Q6P9A3 640 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ABHD17CQ6PCB6 329 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 SBSNQ6UWP8 590 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ANGPTL8Q6UXH0 198 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TMIGD1Q6UXZ0 262 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CTAGE6Q86UF2 777 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 DENND6AQ8IWF6 608 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TRIM42Q8IWZ5 723 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ST13P4Q8IZP2 240 aaPredicted RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 SRFBP1Q8NEF9 429 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 CALML6Q8TD86 181 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 EEF1AKMT1Q8WVE0 214 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ATG4AQ8WYN0 398 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TP53INP1Q96A56 240 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ZNF669Q96BR6 464 aaPredicted RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 RHBDF1Q96CC6 855 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CTHRC1Q96CG8 243 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 LINGO1Q96FE5 620 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ADAD1Q96M93 576 aaKnown RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 SFXN2Q96NB2 322 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 G6PC3Q9BUM1 346 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ERVK-6Q9BXR3 956 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 PHACTR1Q9C0D0 580 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 OR2B2Q9GZK3 357 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 PITHD1Q9GZP4 211 aaPredicted RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 AICDAQ9GZX7 198 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 OR10A4Q9H209 315 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 CHODLQ9H9P2 273 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 NGBQ9NPG2 151 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 DNAJC11Q9NVH1 559 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 TAS2R10Q9NYW0 307 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 KLRF1Q9NZS2 232 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 ERVK-19Q9WJR5 959 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 EMC9Q9Y3B6 208 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 REXO2Q9Y3B8 237 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms