RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 IDO1P14902 403 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 S1PR1P21453 382 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 SOX18P35713 384 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 NATD1Q8N6N6 113 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR5L2Q8NGL0 311 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 THAP3Q8WTV1 239 aaPredicted RBP30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 CCDC28BQ9BUN5 200 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 NPHS2Q9NP85 383 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 FGFR1OP2Q9NVK5 253 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 GPR45Q9Y5Y3 372 aa30.76■■■□□ 2.51
CTDNEP1-209ENST00000574205 SPTA1P02549 2419 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR6C76A6NM76 312 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 CLPSP04118 112 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 MRPS35P82673 323 aaKnown RBP30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 CAMKMTQ7Z624 323 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 C9orf40Q8IXQ3 194 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 ZFP28Q8NHY6 868 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 NUBPLQ8TB37 319 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 COQ8BQ96D53 544 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR10A5Q9H207 317 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 ACSS1Q9NUB1 689 aaPredicted RBP30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 ABI3Q9P2A4 366 aa30.75■■■□□ 2.51
CTDNEP1-209ENST00000574205 UBDO15205 165 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 DPM1O60762 260 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 LAMP1P11279 417 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 MLF1P58340 268 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 GSTA3Q16772 222 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 TRMT12Q53H54 448 aaKnown RBP30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 TMEM198Q66K66 360 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 SLC29A4Q7RTT9 530 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 ZADH2Q8N4Q0 377 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 ZNF615Q8N8J6 731 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 THOC1Q96FV9 657 aaKnown RBP30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 RNF32Q9H0A6 362 aa30.74■■■□□ 2.51
CTDNEP1-209ENST00000574205 CLNS1AP54105 237 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 RPS6KA2Q15349 733 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 BEST3Q8N1M1 668 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 KAT2AQ92830 837 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 TESCQ96BS2 214 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 BHLHE41Q9C0J9 482 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 MYOTQ9UBF9 498 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 DCTN4Q9UJW0 460 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 DYTNA2CJ06 578 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 TMEM200CA6NKL6 621 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 CDK2AP1O14519 115 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 FCHO1O14526 889 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 MAN1A2O60476 641 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 TROVE2P10155 538 aaKnown RBP eCLIP30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 MANFP55145 182 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 DPY19L1Q2PZI1 675 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 NUDT8Q8WV74 236 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 HAS2Q92819 552 aa30.73■■■□□ 2.51
CTDNEP1-209ENST00000574205 PLOD3O60568 738 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 BCAS2O75934 225 aaPredicted RBP30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 CBX7O95931 251 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 HSPB3Q12988 150 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 EXOSC7Q15024 291 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 MLC1Q15049 377 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 EBPQ15125 230 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 ZNF551Q7Z340 670 aaPredicted RBP30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 RFWD2Q8NHY2 731 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 DUSP26Q9BV47 211 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 BCAP29Q9UHQ4 241 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 CFL2Q9Y281 166 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 BSNQ9UPA5 3926 aa30.72■■■□□ 2.51
CTDNEP1-209ENST00000574205 A0A087WV62 115 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 E9PBE3 544 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 PLOD2O00469 737 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 PRAMEF2O60811 474 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 ITGA10O75578 1167 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 IFI6P09912 130 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 SRSF11Q05519 484 aaKnown RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 PDCD4Q53EL6 469 aaKnown RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR7G2Q8NG99 324 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR52R1Q8NGF1 315 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 OR8J2Q8NGG1 315 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 C16orf52Q8NHV5 167 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 MARK4Q96L34 752 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 ZNF317Q96PQ6 595 aaPredicted RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 CLMPQ9H6B4 373 aa30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 LIN28AQ9H9Z2 209 aaKnown RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 SDR39U1Q9NRG7 319 aaPredicted RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 YARS2Q9Y2Z4 477 aaKnown RBP30.71■■■□□ 2.51
CTDNEP1-209ENST00000574205 WDPCPO95876 746 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 CD97P48960 835 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 NME5P56597 212 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 UFM1P61960 85 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 ARG2P78540 354 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 PGS1Q32NB8 556 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 TMEM107Q6UX40 140 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 TEX37Q96LM6 180 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 GAL3ST4Q96RP7 486 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 WWTR1Q9GZV5 400 aa30.7■■■□□ 2.51
CTDNEP1-209ENST00000574205 A0A0G2JND7 137 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 A0A1W2PRB8 838 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 GPC1P35052 558 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 MC3RP41968 323 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 SOWAHCQ53LP3 525 aaPredicted RBP30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 FHL5Q5TD97 284 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 RBMXL3Q8N7X1 1067 aaKnown RBP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms