RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TBK1Q9UHD2 729 aa8.89□□□□□ -0.99
NPLOC4-212ENST00000573328 BCAP29Q9UHQ4 241 aa8.89□□□□□ -0.99
NPLOC4-212ENST00000573328 RNF6Q9Y252 685 aa8.89□□□□□ -0.99
NPLOC4-212ENST00000573328 CSMD1Q96PZ7 3565 aa8.89□□□□□ -0.99
NPLOC4-212ENST00000573328 NKX2-6A6NCS4 301 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 PPP6CO00743 305 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 AQP7O14520 342 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 SUSD5O60279 629 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 IGHG3P01860 377 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 CLPSP04118 112 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 SBK3P0C264 359 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 ACVR2AP27037 513 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 GCAP28676 217 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 HSD17B3P37058 310 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 FEN1P39748 380 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 KIR3DL1P43629 444 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TRPC1P48995 793 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 NUP107P57740 925 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 FBXW4P57775 412 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 RPP38P78345 283 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 FOXO1Q12778 655 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TOMM20Q15388 145 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 NTRK2Q16620 822 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 GXYLT1Q4G148 440 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 EMC4Q5J8M3 183 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TCHHL1Q5QJ38 904 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TBCELQ5QJ74 424 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 ZNF678Q5SXM1 525 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 FAM219BQ5XKK7 198 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TMEM198Q66K66 360 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 SLC48A1Q6P1K1 146 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 ADGRD1Q6QNK2 874 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 B3GNT6Q6ZMB0 384 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 GPRIN3Q6ZVF9 776 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 LCA5Q86VQ0 697 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 CCDC71Q8IV32 467 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 SLC22A9Q8IVM8 553 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 GSPT2Q8IYD1 628 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 PRR22Q8IZ63 422 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 VWA5B2Q8N398 1253 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 METTL6Q8TCB7 284 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TMEM237Q96Q45 408 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 C1QTNF3Q9BXJ4 246 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 TRIM8Q9BZR9 551 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 SLC6A15Q9H2J7 730 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 ZFP64Q9NPA5 681 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 KCNJ16Q9NPI9 418 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 RYDENQ9NUL5 291 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 VPS29Q9UBQ0 182 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 CFL2Q9Y281 166 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 STK38LQ9Y2H1 464 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 PCDHA9Q9Y5H5 950 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 HRH3Q9Y5N1 445 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 NPFFR2Q9Y5X5 522 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 CHCHD2Q9Y6H1 151 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 ZNF780BQ9Y6R6 833 aa8.88□□□□□ -0.99
NPLOC4-212ENST00000573328 C15orf38-AP3S2A0A0A6YYH1 394 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 GNG14A0A1W2PPG7 69 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 CCDC151A5D8V7 595 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 LRRC3CA6NJW4 275 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 MANBAO00462 879 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 PCDH7O60245 1069 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 DLX3O60479 287 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 HCN1O60741 890 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 WDR1O75083 606 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 ULK1O75385 1050 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 TRAPPC6AO75865 159 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 FAM153BP0C7A2 387 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 RFPL3SP0C7P2 107 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 PYGBP11216 843 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 HSD3B1P14060 373 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 CSNK2A2P19784 350 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 ATP5F1P24539 256 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 HSD3B2P26439 372 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 SSTR2P30874 369 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 GALNT1Q10472 559 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 FUT7Q11130 342 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 CSTF3Q12996 717 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 SLC29A2Q14542 456 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 EXOSC7Q15024 291 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 HYAL4Q2M3T9 481 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 FAM153CQ494X1 144 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 UNC50Q53HI1 259 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 C1orf185Q5T7R7 199 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 BICRALQ6AI39 1079 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 FAM180BQ6P0A1 224 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 TIFABQ6ZNK6 161 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 MMP21Q8N119 569 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 LRRC25Q8N386 305 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 CCNYL1Q8N7R7 359 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 OR7G1Q8NGA0 311 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 CDC26Q8NHZ8 85 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 UBLCP1Q8WVY7 318 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 TP53INP1Q96A56 240 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 LURAP1Q96LR2 239 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 RILPQ96NA2 401 aa8.87□□□□□ -0.99
NPLOC4-212ENST00000573328 ZNF382Q96SR6 550 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms