RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SETXQ7Z333 2677 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 CELA3AP09093 270 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 TIA1P31483 386 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 FBXW4P57775 412 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 DNAJB13P59910 316 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 KCNJ2P63252 427 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 LIPMQ5VYY2 423 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 CLEC6AQ6EIG7 209 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 BNC2Q6ZN30 1099 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 SRRM1Q8IYB3 904 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 CCDC116Q8IYX3 515 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 LRRC25Q8N386 305 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF441Q8N8Z8 693 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 FAM57AQ8TBR7 257 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 C16orf78Q8WTQ4 265 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 CNRIP1Q96F85 164 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 IQCGQ9H095 443 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 SH2D2AQ9NP31 389 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 MAT2BQ9NZL9 334 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 POLR3HQ9Y535 204 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-207ENST00000572043 NPIPA2E9PIF3 369 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 NPIPA3F8WFD2 350 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 SPAG7O75391 227 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 GLSO94925 669 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ATP1B1P05026 303 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ANXA4P09525 319 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 NUDT17P0C025 328 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 PCSK2P16519 638 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 S1PR1P21453 382 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 GRNP28799 593 aaKnown RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 MRPS35P82673 323 aaKnown RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 MGAT2Q10469 447 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 FOXO1Q12778 655 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 DUSP8Q13202 625 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 PCLAFQ15004 111 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 TRMT12Q53H54 448 aaKnown RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ARHGAP11AQ6P4F7 1023 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 RPTNQ6XPR3 784 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 FAM109AQ8N4B1 249 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF808Q8N4W9 903 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 OR7G1Q8NGA0 311 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 OR52R1Q8NGF1 315 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 PAQR8Q8TEZ7 354 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 AENQ8WTP8 325 aaKnown RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ADIPOR1Q96A54 375 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 APOPT1Q96IL0 206 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF681Q96N22 645 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 ANKRA2Q9H9E1 313 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC17A7Q9P2U7 560 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 TNFRSF10DQ9UBN6 386 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 PLLPQ9Y342 182 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 PTGDR2Q9Y5Y4 395 aa16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 CHCHD2Q9Y6H1 151 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-207ENST00000572043 NME6O75414 186 aaPredicted RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 GPX3P22352 226 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 SMSP52788 366 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 MAP4K2Q12851 820 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 HEPACAMQ14CZ8 416 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 CDSNQ15517 529 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 NTRK2Q16620 822 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 BICRALQ6AI39 1079 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 SP5Q6BEB4 398 aaPredicted RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 PAOXQ6QHF9 649 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 RGS9BPQ6ZS82 235 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 TRABD2AQ86V40 505 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 FBXW8Q8N3Y1 598 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 OR9A2Q8NGT5 310 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 DIO2Q92813 273 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 KAT2AQ92830 837 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 TP53INP1Q96A56 240 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZBTB9Q96C00 473 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 FAM111AQ96PZ2 611 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 DOHHQ9BU89 302 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 MECRQ9BV79 373 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 GATA5Q9BWX5 397 aaPredicted RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 NXF5Q9H1B4 397 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 LDAHQ9H6V9 325 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZDHHC11Q9H8X9 412 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 MID2Q9UJV3 735 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 CNOT11Q9UKZ1 510 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 ENTPD4Q9Y227 616 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 HRH3Q9Y5N1 445 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 NPFFR2Q9Y5X5 522 aa16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 USP9XQ93008 2570 aaPredicted RBP16.36■□□□□ 0.21
CTDNEP1-207ENST00000572043 ADAM10O14672 748 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF500O60304 480 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 CBX7O95931 251 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 RFPL3SP0C7P2 107 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 DRD2P14416 443 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 ALDH3A1P30838 453 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 SOX18P35713 384 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 NRG3P56975 720 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 NAA20P61599 178 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 C2orf80Q0P641 193 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 RPS6KA2Q15349 733 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms