RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNF490Q9ULM2 529 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 DLGAP4Q9Y2H0 992 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 TENM1Q9UKZ4 2725 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 C2orf92A0A1B0GVN3 265 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 MAGEB16A2A368 324 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR6C76A6NM76 312 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 RTCAO00442 366 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 PRAMEF4O60810 478 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 DANCRP0C864 163 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 ALOX15P16050 662 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZNF708P17019 499 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 CPN2P22792 545 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 HPDP32754 393 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 GDF5P43026 501 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNC1P48547 511 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 SIRPAP78324 504 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 PLIN5Q00G26 463 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 TGM3Q08188 693 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 SPRED3Q2MJR0 410 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMEM249Q2WGJ8 235 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 C18orf21Q32NC0 220 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 PRAMEF9Q5VWM5 478 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR2A2Q6IF42 318 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 IFNEQ86WN2 208 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 PRR22Q8IZ63 422 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 KRT78Q8N1N4 520 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR14L1PQ8NHC6 308 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 RDH11Q8TC12 318 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 TP53INP1Q96A56 240 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZNF845Q96IR2 970 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNC2Q96PR1 638 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 LPAR3Q9UBY5 353 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 RNF112Q9ULX5 631 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 LIPT1Q9Y234 373 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 SPACA6W5XKT8 324 aa9.42□□□□□ -0.9
CTDNEP1-202ENST00000570380 CADP27708 2225 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SDR42E2A6NKP2 422 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 EMC8O43402 210 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ICOSLGO75144 302 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 PRKRAO75569 313 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 WDR47O94967 919 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ABCB1P08183 1280 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 CD8BP10966 210 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SSTR4P31391 388 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 PTGDSP41222 190 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMED10P49755 219 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 RPP38P78345 283 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SARNPP82979 210 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 BIKQ13323 160 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 PDAP1Q13442 181 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 CCNG2Q16589 344 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SEL1L2Q5TEA6 688 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ANKRD22Q5VYY1 191 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 C18orf63Q68DL7 685 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 DRICH1Q6PGQ1 229 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ST13P4Q8IZP2 240 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SYCE1Q8N0S2 351 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 AGGF1Q8N302 714 aaeCLIP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ARIH2OSQ8N7S6 290 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 WDSUB1Q8N9V3 476 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 RAB3IL1Q8TBN0 382 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 RIT1Q92963 219 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ADIPOR1Q96A54 375 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 REPS1Q96D71 796 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SERPINB12Q96P63 405 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 TBCDQ9BTW9 1192 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 ROGDIQ9GZN7 287 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 PITHD1Q9GZP4 211 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 SHARPINQ9H0F6 387 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 RPF2Q9H7B2 306 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 METTL7AQ9H8H3 244 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 EXO1Q9UQ84 846 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 MAGED1Q9Y5V3 778 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-202ENST00000570380 IGHV4-30-2A0A087WSY4 118 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC22A20A6NK97 555 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 WASHC1A8K0Z3 465 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 CDH16O75309 829 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 CBR3O75828 277 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 SCELO95171 688 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 AHSGP02765 367 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 HIST1H1TP22492 207 aaPredicted RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 ABCD3P28288 659 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 MAGEA6P43360 314 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNJ1P48048 391 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 RPS13P62277 151 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 UBAP2Q5T6F2 1119 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 ADAM5Q6NVV9 412 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC30A6Q6NXT4 461 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMEM81Q6P7N7 255 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 GSTA5Q7RTV2 222 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms