RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 BCAP29Q9UHQ4 241 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF639Q9UID6 485 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 HAO1Q9UJM8 370 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 SHANK1Q9Y566 2161 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 C2orf92A0A1B0GVN3 265 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 MYO1GB0I1T2 1018 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SNNO75324 88 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-213ENST00000568158 NME6O75414 186 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-213ENST00000568158 WISP2O76076 250 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 NADKO95544 446 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-213ENST00000568158 KITP10721 976 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 CD46P15529 392 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 PCSK2P16519 638 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SOX3P41225 446 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 MRPS35P82673 323 aaKnown RBP12.04□□□□□ -0.48
CNOT1-213ENST00000568158 PMP22Q01453 160 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 DUSP8Q13202 625 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 ATP6AP1LQ52LC2 224 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF385BQ569K4 471 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 C6orf163Q5TEZ5 329 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SLC29A4Q7RTT9 530 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GALNTL5Q7Z4T8 443 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 MDGA2Q7Z553 956 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 LIX1Q8N485 282 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GOLGA6L1Q8N7Z2 621 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 FNDC5Q8NAU1 212 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 OR9A2Q8NGT5 310 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 NUBPLQ8TB37 319 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GRHL3Q8TE85 626 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 ASB15Q8WXK1 588 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 CTHRC1Q96CG8 243 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SCMH1Q96GD3 660 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GAL3ST4Q96RP7 486 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 CCT7Q99832 543 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 NUF2Q9BZD4 464 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 WWTR1Q9GZV5 400 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GLIPR2Q9H4G4 154 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 REEP4Q9H6H4 257 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 AKTIPQ9H8T0 292 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 MIEF1Q9NQG6 463 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 GIMAP4Q9NUV9 329 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.04□□□□□ -0.489e-14■□□□□ 10.9
CNOT1-213ENST00000568158 ZNF446Q9NWS9 450 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 TAS2R7Q9NYW3 318 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 ENTPD4Q9Y227 616 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 TMED5Q9Y3A6 229 aa12.04□□□□□ -0.48
CNOT1-213ENST00000568158 OR6C76A6NM76 312 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 A8MVJ9 347 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 HMGB1P1B2RPK0 211 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-213ENST00000568158 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 SNUPNO95149 360 aaKnown RBP12.03□□□□□ -0.48
CNOT1-213ENST00000568158 RASAL1O95294 804 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 CBX7O95931 251 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 MPIP34949 423 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 NR0B1P51843 470 aaKnown RBP12.03□□□□□ -0.48
CNOT1-213ENST00000568158 EBPQ15125 230 aaKnown RBP12.03□□□□□ -0.48
CNOT1-213ENST00000568158 CEBPEQ15744 281 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 MPEG1Q2M385 716 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF628Q5EBL2 1059 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-213ENST00000568158 TRIM42Q8IWZ5 723 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 CYP4Z2PQ8N1L4 340 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 VWA5B2Q8N398 1253 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 HORMAD2Q8N7B1 307 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 OR52R1Q8NGF1 315 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 C16orf52Q8NHV5 167 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 C5orf34Q96MH7 638 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 HPF1Q9NWY4 346 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 ERVK-11Q9UQG0 969 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 DTX4Q9Y2E6 619 aa12.03□□□□□ -0.48
CNOT1-213ENST00000568158 UQCRHLA0A096LP55 91 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 TCP11X1B4DZS4 312 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 VPS4BO75351 444 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 SLC25A12O75746 678 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 WISP1O95388 367 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 G6PDP11413 515 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 PRPS2P11908 318 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 EFNA1P20827 205 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 MAPK1P28482 360 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 EMDP50402 254 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 NCBP2P52298 156 aaKnown RBP eCLIP12.02□□□□□ -0.496e-15■□□□□ 10.1
CNOT1-213ENST00000568158 PPP2R2AP63151 447 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 OCRLQ01968 901 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 EMX2Q04743 252 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 HLA-DQA1Q5Y7H0 255 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 IKBIPQ70UQ0 350 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF551Q7Z340 670 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 SULF2Q8IWU5 870 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 SAMD14Q8IZD0 417 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 FAM9CQ8IZT9 166 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF441Q8N8Z8 693 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms