RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TRIM4Q9C037 500 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF552Q9H707 407 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ANKRA2Q9H9E1 313 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SIRT3Q9NTG7 399 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ATAD3AQ9NVI7 634 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ADAM21Q9UKJ8 722 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ITPR1Q14643 2758 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 DYRK3O43781 588 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 MAN1A2O60476 641 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 PLOD3O60568 738 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 IFI6P09912 130 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 KIR3DL1P43629 444 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 CLCN2P51788 898 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 DGKQP52824 942 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-222ENST00000568034 RHDQ02161 417 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 HSPB3Q12988 150 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 EXOSC7Q15024 291 aaKnown RBP16.72■□□□□ 0.27
COMMD4-222ENST00000568034 PGS1Q32NB8 556 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 B3GNTL1Q67FW5 361 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-222ENST00000568034 TMEM107Q6UX40 140 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 CLECL1Q8IZS7 167 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 ARMC10Q8N2F6 343 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 NATD1Q8N6N6 113 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 SIRT6Q8N6T7 355 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 PSMA8Q8TAA3 256 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 ELP4Q96EB1 424 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 NSRP1Q9H0G5 558 aaKnown RBP16.72■□□□□ 0.27
COMMD4-222ENST00000568034 RABEP2Q9H5N1 569 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 GPR83Q9NYM4 423 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 TRIM33Q9UPN9 1127 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 PCDHGA9Q9Y5G4 932 aaKnown RBP16.72■□□□□ 0.27
COMMD4-222ENST00000568034 BSNQ9UPA5 3926 aa16.72■□□□□ 0.27
COMMD4-222ENST00000568034 A0A1W2PRB8 838 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 PLOD2O00469 737 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 RNASET2O00584 256 aaKnown RBP16.71■□□□□ 0.27
COMMD4-222ENST00000568034 PSMG1O95456 288 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 C6orf47O95873 294 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 NCF2P19878 526 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-222ENST00000568034 MC3RP41968 323 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 STX1BP61266 288 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 AP2B1P63010 937 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 EBPQ15125 230 aaKnown RBP16.71■□□□□ 0.27
COMMD4-222ENST00000568034 CPSF7Q8N684 471 aaKnown RBP16.71■□□□□ 0.27
COMMD4-222ENST00000568034 OR7G1Q8NGA0 311 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 OR52R1Q8NGF1 315 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 OR8K3Q8NH51 312 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 ZFP28Q8NHY6 868 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 OR5P2Q8WZ92 322 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 ERP27Q96DN0 273 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 ZBTB18Q99592 522 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 EPN3Q9H201 632 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 OR10A5Q9H207 317 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 SLC52A3Q9NQ40 469 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 COPS7AQ9UBW8 275 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 DTX4Q9Y2E6 619 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 CPAMD8Q8IZJ3 1885 aa16.71■□□□□ 0.27
COMMD4-222ENST00000568034 A0A087WV62 115 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 FAM234BA2RU67 622 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 K7EM74 188 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 UPK1AO00322 258 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 NME6O75414 186 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-222ENST00000568034 SLITRK5O94991 958 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 PDGFAP04085 211 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 PGRP06401 933 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 FAM87AP0C7U9 286 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 S100A3P33764 101 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 EMDP50402 254 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 MANFP55145 182 aaKnown RBP16.7■□□□□ 0.26
COMMD4-222ENST00000568034 HBA1P69905 142 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 RNF4P78317 190 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 RCAN2Q14206 197 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 C6orf163Q5TEZ5 329 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 FCRLBQ6BAA4 426 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 HSDL2Q6YN16 418 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 RNF111Q6ZNA4 994 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 PIGWQ7Z7B1 504 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 ANKRD46Q86W74 232 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 OR2L13Q8N349 312 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 ZNF441Q8N8Z8 693 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 EXD3Q8N9H8 876 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 C16orf52Q8NHV5 167 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 SMAD5Q99717 465 aaKnown RBP16.7■□□□□ 0.26
COMMD4-222ENST00000568034 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 CXorf36Q9H7Y0 433 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 ZBTB20Q9HC78 741 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-222ENST00000568034 SAR1AQ9NR31 198 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 FAM120CQ9NX05 1096 aaKnown RBP16.7■□□□□ 0.26
COMMD4-222ENST00000568034 PTGFRNQ9P2B2 879 aa16.7■□□□□ 0.26
COMMD4-222ENST00000568034 NUP214P35658 2090 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 PRSS51A0A1B0GVH4 220 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 OR6C76A6NM76 312 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 ZFAND5O76080 213 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 IL6P05231 212 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 POLR2JP52435 117 aaKnown RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 UBAP2LQ14157 1087 aaKnown RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 CRB2Q5IJ48 1285 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 BLOC1S3Q6QNY0 202 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms