RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GARNL3Q5VVW2 1013 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PRAMEF8Q5VWM4 474 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PRAMEF7Q5VXH5 474 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 OR2T5Q6IEZ7 315 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ZC3H7AQ8IWR0 971 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 CLEC4FQ8N1N0 589 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ARL10Q8N8L6 244 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 OR2T29Q8NH02 315 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ZCCHC10Q8TBK6 192 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ADAMTS18Q8TE60 1221 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RASSF5Q8WWW0 418 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ZDHHC12Q96GR4 267 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 HSH2DQ96JZ2 352 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 FCRL4Q96PJ5 515 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF347Q96SE7 839 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ZCCHC3Q9NUD5 404 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PDP2Q9P2J9 529 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 P2RX2Q9UBL9 471 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PADI2Q9Y2J8 665 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 TP53BP1Q12888 1972 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 TMEM131Q92545 1883 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 LOC105369274A0A096LPK9 316 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 LOC102723532A0A0G2JNH3 316 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 H0YAE9 185 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 EI24O14681 340 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 PGRMC2O15173 223 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 EMC8O43402 210 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ASNA1O43681 348 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 NUDT21O43809 227 aaKnown RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 GALR3O60755 368 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 E2F6O75461 281 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 BMP10O95393 424 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 C1QCP02747 245 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 MT-ND1P03886 318 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ST6GAL1P15907 406 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 CTSKP43235 329 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 MAPK10P53779 464 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ARSFP54793 590 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 EMP3P54852 163 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ITGA1P56199 1179 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 CLDN6P56747 220 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 LY6DQ14210 128 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 PRTGQ2VWP7 1150 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 DEFB134Q4QY38 66 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 IFI44LQ53G44 452 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 COLEC12Q5KU26 742 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 C18orf63Q68DL7 685 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 FRMPD2BQ6IN97 320 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 SHQ1Q6PI26 577 aaKnown RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 DHRS13Q6UX07 377 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF761Q86XN6 746 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ARMC8Q8IUR7 673 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 MCATQ8IVS2 390 aaKnown RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 SFTPA2Q8IWL1 248 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 CHERPQ8IWX8 916 aaKnown RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 OR4N4Q8N0Y3 316 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 LRRC25Q8N386 305 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 OR4K14Q8NGD5 310 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 NFKBIDQ8NI38 313 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 GEMIN6Q8WXD5 167 aaKnown RBP13.74□□□□□ -0.21
COMMD4-221ENST00000567935 TFAP2CQ92754 450 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 TANKQ92844 425 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 MAL2Q969L2 176 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 C10orf90Q96M02 699 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF681Q96N22 645 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF285Q96NJ3 590 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 ADI1Q9BV57 179 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 NTMQ9P121 344 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 C5AR2Q9P296 337 aa13.74□□□□□ -0.21
COMMD4-221ENST00000567935 PDLIM1O00151 329 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 YKT6O15498 198 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 TNFAIP8O95379 198 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 AGR2O95994 175 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 ALPLP05186 524 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 EIF2S1P05198 315 aaKnown RBP13.73□□□□□ -0.21
COMMD4-221ENST00000567935 DNAJA1P31689 397 aaKnown RBP13.73□□□□□ -0.21
COMMD4-221ENST00000567935 VSX2P58304 361 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-221ENST00000567935 GPLD1P80108 840 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 TLE3Q04726 772 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 MERTKQ12866 999 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 NR1D2Q14995 579 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 C16orf72Q14CZ0 275 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 DEFB133Q30KQ1 61 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 UGT2A3Q6UWM9 527 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 STK32CQ86UX6 486 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 CARM1Q86X55 608 aa13.73□□□□□ -0.21
COMMD4-221ENST00000567935 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms