RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TAGAPQ8N103 731 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 C1orf52Q8N6N3 182 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CCNYL1Q8N7R7 359 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF615Q8N8J6 731 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GBP7Q8N8V2 638 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF454Q8N9F8 522 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FAM13CQ8NE31 585 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 OR7G1Q8NGA0 311 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 PAQR8Q8TEZ7 354 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 MZB1Q8WU39 189 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 PHF10Q8WUB8 498 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 UBLCP1Q8WVY7 318 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SPACA9Q96E40 222 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 TMEM237Q96Q45 408 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GAL3ST4Q96RP7 486 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 DMRTA2Q96SC8 542 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FAIM2Q9BWQ8 316 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 TTTY12Q9BZ98 90 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 WWTR1Q9GZV5 400 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 OR10A5Q9H207 317 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 RUBCNLQ9H714 662 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZDHHC11Q9H8X9 412 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 PPCSQ9HAB8 311 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SH2D2AQ9NP31 389 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CHST11Q9NPF2 352 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 PLSCR2Q9NRY7 297 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ARGLU1Q9NWB6 273 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CES1P1Q9UKY3 287 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF780BQ9Y6R6 833 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SPG11Q96JI7 2443 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 A0A1B0GVC2 190 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ATP6AP2A0A1C7CYW4 349 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 OR14I1A6ND48 311 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NPIPA2E9PIF3 369 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NPIPA3F8WFD2 350 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TP53I11O14683 189 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 SUSD5O60279 629 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 GLRA3O75311 464 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ERAL1O75616 437 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ATP6AP2O75787 350 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CLDN14O95500 239 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ESRRBO95718 433 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 IGHG3P01860 377 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 PROCP04070 461 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CLPSP04118 112 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ATP1B1P05026 303 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 FBXO45P0C2W1 286 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CT62P0C5K7 136 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 DRD2P14416 443 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CPA3P15088 417 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CHN1P15882 459 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 KRT15P19012 456 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 GRNP28799 593 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TNFRSF8P28908 595 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CRHR1P34998 444 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 PIGAP37287 484 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 FEN1P39748 380 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 SLCO1A2P46721 670 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 DNASE1L1P49184 302 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ALDH9A1P49189 494 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NR0B1P51843 470 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NRG3P56975 720 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 DNAJB13P59910 316 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 BTKQ06187 659 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ACSM2AQ08AH3 577 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 MGAT2Q10469 447 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 LCP2Q13094 533 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 EBPQ15125 230 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NTRK2Q16620 822 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC153Q494R4 210 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 GXYLT1Q4G148 440 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 SPIN4Q56A73 249 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CFAP157Q5JU67 520 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TCHHL1Q5QJ38 904 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ACSM2BQ68CK6 577 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 FAM111BQ6SJ93 734 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TMEM64Q6YI46 380 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CD163Q86VB7 1156 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TDRPQ86YL5 185 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 FAM109AQ8N4B1 249 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TMEM251Q8N6I4 163 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF441Q8N8Z8 693 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 OR5M3Q8NGP4 307 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ADIPOR1Q96A54 375 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 HBEGFQ99075 208 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 ACPTQ9BZG2 426 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TP63Q9H3D4 680 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 GSTO2Q9H4Y5 243 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 LDAHQ9H6V9 325 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 MID1IP1Q9NPA3 183 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TUBA8Q9NY65 449 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 MCM8Q9UJA3 840 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 EMCNQ9ULC0 261 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 BOKQ9UMX3 212 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 DLGAP4Q9Y2H0 992 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 TIMM22Q9Y584 194 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms