RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZNF717Q9BY31 904 aaPredicted RBP17.1■□□□□ 0.33
LINC01238-205ENST00000567549 Q9UFV3 132 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC01238-205ENST00000567549 CNOT11Q9UKZ1 510 aaKnown RBP17.1■□□□□ 0.33
LINC01238-205ENST00000567549 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
LINC01238-205ENST00000567549 ARHGAP21Q5T5U3 1957 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 TACC2O95359 2948 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 CSMD1Q96PZ7 3565 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 TRAPPC6AO75865 159 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 ALDOAP04075 364 aaKnown RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 CELA3AP09093 270 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 PORP16435 677 aaPredicted RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 NT5EP21589 574 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 XKP51811 444 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 PSPHP78330 225 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 FUT7Q11130 342 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 ARSKQ6UWY0 536 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 RNF175Q8N4F7 328 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 NOA1Q8NC60 698 aaKnown RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 NINJ1Q92982 152 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 PHF21BQ96EK2 531 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 OR10A5Q9H207 317 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 BRF2Q9HAW0 419 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 ZNF629Q9UEG4 869 aaPredicted RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 NINQ8N4C6 2090 aa17.09■□□□□ 0.33
LINC01238-205ENST00000567549 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
LINC01238-205ENST00000567549 HRKO00198 91 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 TRIM3O75382 744 aaPredicted RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 SIX3O95343 332 aaPredicted RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 CPMP14384 443 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 GMPRP36959 345 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 KIR2DL3P43628 341 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 ASCL1P50553 236 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 NEK2P51955 445 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 KRTAP10-9P60411 292 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 DCAF7P61962 342 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 TOMM20Q15388 145 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 ADGRD1Q6QNK2 874 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 DGAT2L6Q6ZPD8 337 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 KIF18BQ86Y91 864 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 SAMD14Q8IZD0 417 aaPredicted RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 VWA5B2Q8N398 1253 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 CHDHQ8NE62 594 aaPredicted RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 SPPL2AQ8TCT8 520 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 RILPQ96NA2 401 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 MRPL57Q9BQC6 102 aaKnown RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 ANGPTL4Q9BY76 406 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 MRPL46Q9H2W6 279 aaKnown RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 METTL7AQ9H8H3 244 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 ARGLU1Q9NWB6 273 aaPredicted RBP17.08■□□□□ 0.32
LINC01238-205ENST00000567549 SPRR3Q9UBC9 169 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 STK38LQ9Y2H1 464 aa17.08■□□□□ 0.32
LINC01238-205ENST00000567549 POLQO75417 2590 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ESYT3A0FGR9 886 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 LRRC3CA6NJW4 275 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ACOX3O15254 700 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 PRKRAO75569 313 aaKnown RBP17.07■□□□□ 0.32
LINC01238-205ENST00000567549 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
LINC01238-205ENST00000567549 EPPINO95925 133 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 KLK1P06870 262 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 RFPL3SP0C7P2 107 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 CSNK2A2P19784 350 aaPredicted RBP17.07■□□□□ 0.32
LINC01238-205ENST00000567549 TAC1P20366 129 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 SSTR4P31391 388 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 TIMP3P35625 211 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 TRA2BP62995 288 aaKnown RBP17.07■□□□□ 0.32
LINC01238-205ENST00000567549 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 DUSP8Q13202 625 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 RCAN2Q14206 197 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 TESK1Q15569 626 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 SLC44A1Q8WWI5 657 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ISL2Q96A47 359 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 TMEM41AQ96HV5 264 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 GPR78Q96P69 363 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 FUT8Q9BYC5 575 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 SLC6A15Q9H2J7 730 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ZDHHC18Q9NUE0 388 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 PRODH2Q9UF12 536 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 PCTPQ9UKL6 214 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 ZNF780BQ9Y6R6 833 aa17.07■□□□□ 0.32
LINC01238-205ENST00000567549 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 OR7A17O14581 309 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 GOSR1O95249 250 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 HPNP05981 417 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 HSD3B1P14060 373 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 ENDOUP21128 410 aaKnown RBP17.06■□□□□ 0.32
LINC01238-205ENST00000567549 HSD3B2P26439 372 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 UQCRC1P31930 480 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 TRPC1P48995 793 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 SNTA1Q13424 505 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 SLC30A6Q6NXT4 461 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 SLC48A1Q6P1K1 146 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 TMEM81Q6P7N7 255 aa17.06■□□□□ 0.32
LINC01238-205ENST00000567549 LCA5Q86VQ0 697 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms