RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 OR1L4Q8NGR5 311 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 OR9A1PQ8NGU1 263 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SUN5Q8TC36 379 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PIBF1Q8WXW3 757 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SMPDL3AQ92484 453 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 LPAR1Q92633 364 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SARAFQ96BY9 339 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 NXPE2Q96DL1 559 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SGK494Q96LW2 274 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 TSNARE1Q96NA8 513 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 UHRF2Q96PU4 802 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 OR1F2PQ96R84 312 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ERGIC2Q96RQ1 377 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RTP3Q9BQQ7 232 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 DUSP26Q9BV47 211 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RHOJQ9H4E5 214 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM185BQ9H7F4 350 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PCDH9Q9HC56 1237 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GDF3Q9NR23 364 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 TUBG2Q9NRH3 451 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ADARB2Q9NS39 739 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 UFSP2Q9NUQ7 469 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC2A8Q9NY64 477 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 POLKQ9UBT6 870 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ZDHHC2Q9UIJ5 367 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ERRFI1Q9UJM3 462 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 FZR1Q9UM11 496 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SATB2Q9UPW6 733 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 WDR45Q9Y484 360 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RAD54L2Q9Y4B4 1467 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 MADDQ8WXG6 1647 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 KANK1Q14678 1352 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PLEKHG2Q9H7P9 1386 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SETBP1Q9Y6X0 1596 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 IL16Q14005 1332 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 POLR2AP24928 1970 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 PPIAL4CA0A0B4J2A2 164 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 A0A0G2JNG1 304 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 LOC100653049A0A140TA62 436 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZCWPW2A0A1B0GU75 182 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF814B7Z6K7 855 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 WWP2O00308 870 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TPST2O60704 377 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TOM1O60784 492 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MTRF1O75570 445 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 RFPL2O75678 378 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 KRT33AO76009 404 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 KRT34O76011 436 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SCGNO76038 276 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 NXPH2O95156 264 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CAPN1P07384 714 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PPIAL4GP0DN37 164 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MBL2P11226 248 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 CDK4P11802 303 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ANXA3P12429 323 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CD59P13987 128 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TNNI1P19237 187 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CYP2B6P20813 491 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CTNNA2P26232 953 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MPGP29372 298 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ATP5C1P36542 298 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 RPS5P46782 204 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 DNA2P51530 1060 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MLLT10P55197 1068 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 RPS4XP62701 263 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 HERVK_113P63132 956 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ERVK-8P63133 956 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PITX1P78337 314 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 BDH1Q02338 343 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CNTN1Q12860 1018 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MERTKQ12866 999 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 KIR2DS5Q14953 304 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SF3B4Q15427 424 aaKnown RBP eCLIP3□□□□□ -1.932e-9■□□□□ 10.8
HERPUD1-211ENST00000566550 TGFBIQ15582 683 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 OR1C1Q15619 314 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CHI3L2Q15782 390 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PARP6Q2NL67 630 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM44Q2T9K0 475 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ODF3L2Q3SX64 289 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 GGTA1PQ4G0N0 100 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 LINC01620Q4KN68 170 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 XKR3Q5GH77 459 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TCHHL1Q5QJ38 904 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 DCAF10Q5QP82 559 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 WLSQ5T9L3 541 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 HECTD2Q5U5R9 776 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 OR2A2Q6IF42 318 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SYCE2Q6PIF2 218 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 DPY19L2P2Q6ZN68 376 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 Q6ZRG5 221 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 C19orf35Q6ZS72 473 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CYP4V2Q6ZWL3 525 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC24A5Q71RS6 500 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ASRGL1Q7L266 308 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF627Q7L945 461 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF554Q86TJ5 538 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 GPALPP1Q8IXQ4 340 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 RCOR2Q8IZ40 523 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM9CQ8IZT9 166 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms