RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 GLYATQ6IB77 296 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 SPATA24Q86W54 205 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 PROSER1Q86XN7 944 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 HORMAD2Q8N7B1 307 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 FIG4Q92562 907 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 TSLPQ969D9 159 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 RBM18Q96H35 190 aaKnown RBP28.61■■■□□ 2.17
CTCF-203ENST00000566078 TGIF2Q9GZN2 237 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 SERHL2Q9H4I8 314 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 B3GALT1Q9Y5Z6 326 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 DMXL1Q9Y485 3027 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 IGLV3-12A0A075B6K2 115 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 GMNNO75496 209 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 SLC34A2O95436 690 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 ONECUT2O95948 504 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 CT62P0C5K7 136 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 CSRP1P21291 193 aaKnown RBP28.6■■■□□ 2.17
CTCF-203ENST00000566078 SOX18P35713 384 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 DSTNP60981 165 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 VMACQ2NL98 169 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 SPPL2CQ8IUH8 684 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 OR2L13Q8N349 312 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 STT3BQ8TCJ2 826 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 NCLNQ969V3 563 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 EQTNQ9NQ60 294 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 IFT80Q9P2H3 777 aaPredicted RBP28.6■■■□□ 2.17
CTCF-203ENST00000566078 FAF1Q9UNN5 650 aaPredicted RBP28.6■■■□□ 2.17
CTCF-203ENST00000566078 FAM186AA6NE01 2351 aa28.6■■■□□ 2.17
CTCF-203ENST00000566078 PTPRBP23467 1997 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 CXCR6O00574 342 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 HMGN2P05204 90 aaKnown RBP28.59■■■□□ 2.17
CTCF-203ENST00000566078 AGXTP21549 392 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 MGAT2Q10469 447 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 LASP1Q14847 261 aaKnown RBP28.59■■■□□ 2.17
CTCF-203ENST00000566078 TRMT12Q53H54 448 aaKnown RBP28.59■■■□□ 2.17
CTCF-203ENST00000566078 FHL5Q5TD97 284 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 FBXW10Q5XX13 1052 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 GALNT12Q8IXK2 581 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 NETO1Q8TDF5 533 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 SLC26A7Q8TE54 656 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 MAL2Q969L2 176 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 MS4A4EQ96PG1 132 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 PELOQ9BRX2 385 aaKnown RBP28.59■■■□□ 2.17
CTCF-203ENST00000566078 CXorf21Q9HAI6 301 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 C14orf105Q9NVL8 296 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 NTMQ9P121 344 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 MKL2Q9ULH7 1088 aa28.59■■■□□ 2.17
CTCF-203ENST00000566078 IGKV3D-11A0A0A0MRZ8 115 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 IFNA16P05015 189 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 MATN1P21941 496 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 PRIM2P49643 509 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 KHKP50053 298 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 EFNA3P52797 238 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 BIKQ13323 160 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 EIF3IQ13347 325 aaKnown RBP28.58■■■□□ 2.17
CTCF-203ENST00000566078 LCN10Q6JVE6 187 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 OVCH1Q7RTY7 1134 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 SIMC1Q8NDZ2 872 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 RIT1Q92963 219 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 RSRC1Q96IZ7 334 aaKnown RBP28.58■■■□□ 2.17
CTCF-203ENST00000566078 LRFN5Q96NI6 719 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 TAAR9Q96RI9 348 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 VN1R1Q9GZP7 353 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 OR51I1Q9H343 314 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 GVINP1Q7Z2Y8 2422 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 GIMAP1-GIMAP5A0A087WTJ2 511 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 A0A087WV62 115 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 PLD2O14939 933 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 IFI6P09912 130 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 ZGLP1P0C6A0 271 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 BMP2P12643 396 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 POLE2P56282 527 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 RIPK1Q13546 671 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 SHISA6Q6ZSJ9 500 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 LAPTM4BQ86VI4 370 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 VWA5B2Q8N398 1253 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 CTHRC1Q96CG8 243 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 GIMAP5Q96F15 307 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 NSMCE2Q96MF7 247 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 ZPBPQ9BS86 351 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 YIPF4Q9BSR8 244 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 DDA1Q9BW61 102 aa28.58■■■□□ 2.17
CTCF-203ENST00000566078 C19orf53Q9UNZ5 99 aaPredicted RBP28.58■■■□□ 2.17
CTCF-203ENST00000566078 A0A1W2PNU3 283 aaPredicted RBP28.57■■■□□ 2.16
CTCF-203ENST00000566078 PLOD3O60568 738 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 KRT36O76013 467 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 PSMG1O95456 288 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 KLK3P07288 261 aaPredicted RBP28.57■■■□□ 2.16
CTCF-203ENST00000566078 MRPS22P82650 360 aaKnown RBP28.57■■■□□ 2.16
CTCF-203ENST00000566078 C11orf65Q8NCR3 313 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 OR5D16Q8NGK9 328 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 FAM162AQ96A26 154 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 FKBP10Q96AY3 582 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 C16orf58Q96GQ5 468 aa28.57■■■□□ 2.16
CTCF-203ENST00000566078 ATP6V1G2O95670 118 aa28.56■■■□□ 2.16
CTCF-203ENST00000566078 RECKO95980 971 aa28.56■■■□□ 2.16
CTCF-203ENST00000566078 PCGF2P35227 344 aa28.56■■■□□ 2.16
CTCF-203ENST00000566078 FOXL2P58012 376 aa28.56■■■□□ 2.16
CTCF-203ENST00000566078 MAP4K2Q12851 820 aa28.56■■■□□ 2.16
CTCF-203ENST00000566078 EXOSC7Q15024 291 aaKnown RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms