RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 COPS7AQ9UBW8 275 aa15.49■□□□□ 0.07
RNF40-207ENST00000565931 CCDC88CQ9P219 2028 aa15.49■□□□□ 0.07
RNF40-207ENST00000565931 A0A087WV62 115 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 PRSS51A0A1B0GVH4 220 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 RNASET2O00584 256 aaKnown RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 PRKNO60260 465 aaPredicted RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 ZFAND5O76080 213 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 C6orf47O95873 294 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 CBX7O95931 251 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 PGRP06401 933 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 IFI6P09912 130 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 GPC1P35052 558 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 POLR2JP52435 117 aaKnown RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 RHDQ02161 417 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 HSPB3Q12988 150 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 DUSP8Q13202 625 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 EXOSC7Q15024 291 aaKnown RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 FHL5Q5TD97 284 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 ANXA8L1Q5VT79 327 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 IRAK1BP1Q5VVH5 260 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 TMEM107Q6UX40 140 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 HSDL2Q6YN16 418 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 RNF111Q6ZNA4 994 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 PIGWQ7Z7B1 504 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 SIMC1Q8NDZ2 872 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 OR7G2Q8NG99 324 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 OR8K3Q8NH51 312 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 CCT8L2Q96SF2 557 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 DEFB126Q9BYW3 111 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 OR10A5Q9H207 317 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 ZNF552Q9H707 407 aaPredicted RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 ANKRA2Q9H9E1 313 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 SAR1AQ9NR31 198 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 SIRT3Q9NTG7 399 aaPredicted RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.48■□□□□ 0.07
RNF40-207ENST00000565931 FAM120CQ9NX05 1096 aaKnown RBP15.48■□□□□ 0.07
RNF40-207ENST00000565931 PTPRQQ9UMZ3 2332 aa15.48■□□□□ 0.07
RNF40-207ENST00000565931 A8MUI8 341 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 IL6P05231 212 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 CD1EP15812 388 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 MC3RP41968 323 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 POLE2P56282 527 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 RAPSNQ13702 412 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 AGKQ53H12 422 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 B3GNTL1Q67FW5 361 aaPredicted RBP15.47■□□□□ 0.07
RNF40-207ENST00000565931 C9orf40Q8IXQ3 194 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 CLECL1Q8IZS7 167 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 SIRT6Q8N6T7 355 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 VPS37AQ8NEZ2 397 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 OR52R1Q8NGF1 315 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 PSMA8Q8TAA3 256 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 OR52E6Q96RD3 313 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 NPAS2Q99743 824 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 GPR83Q9NYM4 423 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 CCDC167Q9P0B6 97 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 PTGFRNQ9P2B2 879 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 BCAP29Q9UHQ4 241 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 BTNL2Q9UIR0 455 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 C19orf53Q9UNZ5 99 aaPredicted RBP15.47■□□□□ 0.07
RNF40-207ENST00000565931 ERVK-11Q9UQG0 969 aa15.47■□□□□ 0.07
RNF40-207ENST00000565931 ZFHX4Q86UP3 3567 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 TMEM200CA6NKL6 621 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 OR6C76A6NM76 312 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 UPK1AO00322 258 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 BCAS2O75934 225 aaPredicted RBP15.46■□□□□ 0.07
RNF40-207ENST00000565931 SOX11P35716 441 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 HBA1P69905 142 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 RNF4P78317 190 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 CRB2Q5IJ48 1285 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 FCRLBQ6BAA4 426 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 BLOC1S3Q6QNY0 202 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 ANKRD46Q86W74 232 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 RPS19BP1Q86WX3 136 aaKnown RBP15.46■□□□□ 0.07
RNF40-207ENST00000565931 ARMC10Q8N2F6 343 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 OR2L13Q8N349 312 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 SLC5A8Q8N695 610 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 NUBPLQ8TB37 319 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 CCDC115Q96NT0 180 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 SLC25A23Q9BV35 468 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 TRIM4Q9C037 500 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 NMUR2Q9GZQ4 415 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 CXorf36Q9H7Y0 433 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 SLC52A3Q9NQ40 469 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 NTMQ9P121 344 aa15.46■□□□□ 0.07
RNF40-207ENST00000565931 PCDHGA9Q9Y5G4 932 aaKnown RBP15.46■□□□□ 0.07
RNF40-207ENST00000565931 MAP1BP46821 2468 aaKnown RBP15.46■□□□□ 0.07
RNF40-207ENST00000565931 MKRN2OSH3BPM6 223 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 CFLARO15519 480 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 PRAMEF2O60811 474 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 FAM107AO95990 144 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 EMDP50402 254 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 KCNK10P57789 538 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 KLF10Q13118 480 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 UBAP2LQ14157 1087 aaKnown RBP15.45■□□□□ 0.06
RNF40-207ENST00000565931 RCAN2Q14206 197 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 EBPQ15125 230 aaKnown RBP15.45■□□□□ 0.06
RNF40-207ENST00000565931 TIGD2Q4W5G0 525 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 AGAP7PQ5VUJ5 663 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 TCTN3Q6NUS6 607 aa15.45■□□□□ 0.06
RNF40-207ENST00000565931 ISLR2Q6UXK2 745 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms