RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PIGAP37287 484 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 FEN1P39748 380 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 HMGCS1Q01581 520 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 TBL3Q12788 808 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 PIGGQ5H8A4 983 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 HLA-DQA1Q5Y7H0 255 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 CD163Q86VB7 1156 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 GALNT12Q8IXK2 581 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 OR6Y1Q8NGX8 325 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 CDC26Q8NHZ8 85 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 NUBPLQ8TB37 319 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ITLN2Q8WWU7 325 aaPredicted RBP12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 TLCD1Q96CP7 247 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 EBPLQ9BY08 206 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 SHCBP1LQ9BZQ2 653 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 WWTR1Q9GZV5 400 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 NMRK1Q9NWW6 199 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ADAM29Q9UKF5 820 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 FREM3P0C091 2139 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 SERTM1A2A2V5 107 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 PRRG2O14669 202 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 NPHS1O60500 1241 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 GUCY1B2O75343 617 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 CRCPO75575 148 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 CPMP14384 443 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 CNR1P21554 472 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 SERPINB3P29508 390 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 PTGS2P35354 604 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 SERPINB4P48594 390 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC18A1P54219 525 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 FOXA1P55317 472 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC37A1P57057 533 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ADORA2A-AS1P86434 159 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 CSTF3Q12996 717 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 EBPQ15125 230 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 FAM111BQ6SJ93 734 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 GK5Q6ZS86 529 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 HDXQ7Z353 690 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 PRR22Q8IZ63 422 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ZFP62Q8NB50 900 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 C16orf52Q8NHV5 167 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 APIPQ96GX9 242 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 JSRP1Q96MG2 331 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 FAM173AQ9BQD7 235 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 TTTY12Q9BZ98 90 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 CXorf21Q9HAI6 301 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 TNFRSF12AQ9NP84 129 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 TUBA8Q9NY65 449 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 VPS29Q9UBQ0 182 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 BCAP29Q9UHQ4 241 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 ITPR3Q14573 2671 aa12.58□□□□□ -0.4
VPS9D1-204ENST00000565023 C2orf92A0A1B0GVN3 265 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 ATP6AP2A0A1C7CYW4 349 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 GNG14A0A1W2PPG7 69 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 C1orf226A1L170 272 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 BIRC5O15392 142 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 PCDH7O60245 1069 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 ATP6AP2O75787 350 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 CLPSP04118 112 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SNRPB2P08579 225 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 PORP16435 677 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 GRNP28799 593 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SERPINB5P36952 375 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 MAGEA5P43359 124 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 DUSP2Q05923 314 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 EXOSC7Q15024 291 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 LTB4RQ15722 352 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 NNATQ16517 81 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 MPEG1Q2M385 716 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SPDYAQ5MJ70 313 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 AGBL2Q5U5Z8 902 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SP5Q6BEB4 398 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC48A1Q6P1K1 146 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 MTFR2Q6P444 385 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 Q6ZPB1 254 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 ZCCHC23Q6ZST2 131 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 NUDCD3Q8IVD9 361 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 CHERPQ8IWX8 916 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 GOLM1Q8NBJ4 401 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 FAIM2Q9BWQ8 316 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms