RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 RAPSNQ13702 412 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CSHL1Q14406 222 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CAPRIN1Q14444 709 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 GBX1Q14549 363 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 IRF3Q14653 427 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 EMC2Q15006 297 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PTPRRQ15256 657 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MAPKAPK3Q16644 382 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TATDN3Q17R31 274 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TMEM44Q2T9K0 475 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 HKDC1Q2TB90 917 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 WSCD2Q2TBF2 565 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 XKR7Q5GH72 579 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PXDC1Q5TGL8 231 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 BSPRYQ5W0U4 402 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FAHD1Q6P587 224 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TBPL2Q6SJ96 375 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FAM131AQ6UXB0 335 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TMEM108Q6UXF1 575 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 BAIAP2L2Q6UXY1 529 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TFAP2EQ6VUC0 442 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ARMCX2Q7L311 632 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 BNIPLQ7Z465 357 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 HSD17B13Q7Z5P4 300 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 C14orf80Q86SX3 495 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SERPINA11Q86U17 422 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 COMMD7Q86VX2 200 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 NAXDQ8IW45 347 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RNF113BQ8IZP6 322 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 TAGAPQ8N103 731 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 LINC00471Q8N535 108 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CELF5Q8N6W0 485 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 FAM83FQ8NEG4 500 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 OR52K1Q8NGK4 314 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 GPR150Q8NGU9 434 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CLHC1Q8NHS4 586 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TEX47Q8TBZ9 253 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RNF139Q8WU17 664 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 HERVK_113Q902F9 699 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SGCDQ92629 289 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SGK3Q96BR1 496 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 OTUB1Q96FW1 271 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 MSANTD3Q96H12 275 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PPP1R36Q96LQ0 422 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PEBP4Q96S96 227 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 P2RX7Q99572 595 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 GAL3ST1Q99999 423 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TBL1YQ9BQ87 522 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 THUMPD3Q9BV44 507 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 ALG8Q9BVK2 526 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CINPQ9BW66 212 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 ACTRT3Q9BYD9 372 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SMOC2Q9H3U7 446 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 C8orf33Q9H7E9 229 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 MID1IP1Q9NPA3 183 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MRPS18AQ9NVS2 196 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 CLN6Q9NWW5 311 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ZSCAN32Q9NX65 697 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RDH8Q9NYR8 311 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FBXO40Q9UH90 709 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 NUFIP1Q9UHK0 495 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 SCP2D1Q9UJQ7 156 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FZD10Q9ULW2 581 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ABCG2Q9UNQ0 655 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 NCKAP1Q9Y2A7 1128 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TMEM5Q9Y2B1 443 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ABCA3Q99758 1704 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TANC1Q9C0D5 1861 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ZNFX1Q9P2E3 1918 aaKnown RBP5.29□□□□□ -1.56
CHD9-210ENST00000564582 GLYATL1P3A0A0U1RQE8 302 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 hCG_1807616A0A1W2PRN6 198 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 TRAPPC13A5PLN9 417 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 E9PQ18 207 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 F8W036 122 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 INMT-MINDY4F8WBC2 141 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 H7C0S8 307 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 CACNB4O00305 520 aaPredicted RBP5.29□□□□□ -1.56
CHD9-210ENST00000564582 DSCR3O14972 297 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 PIP5K1BO14986 540 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 PER2O15055 1255 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 ADAM12O43184 909 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 FRS3O43559 492 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 XPNPEP2O43895 674 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 KIAA0513O60268 411 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 KERAO60938 352 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 CREG1O75629 220 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 OLFM2O95897 454 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 MT-ND1P03886 318 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 CNPP09543 421 aaKnown RBP5.29□□□□□ -1.56
CHD9-210ENST00000564582 CSF3P09919 207 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 ALDOCP09972 364 aaKnown RBP5.29□□□□□ -1.56
CHD9-210ENST00000564582 PRPS2P11908 318 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 SLC2A4P14672 509 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 ARSBP15848 533 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 SPNP16150 400 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 CTPS1P17812 591 aa5.29□□□□□ -1.56
CHD9-210ENST00000564582 EN2P19622 333 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms