RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 FXYD1O00168 92 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 OR10H2O60403 315 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 HEXBP07686 556 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 IFI6P09912 130 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 GPC1P35052 558 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 STT3AP46977 705 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 CDK9P50750 372 aaKnown RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 EFNA3P52797 238 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 EMP2P54851 167 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 HSPB3Q12988 150 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 C16orf89Q6UX73 402 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 TMEM64Q6YI46 380 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 ZNF621Q6ZSS3 439 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 PRSS58Q8IYP2 241 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 ULK2Q8IYT8 1036 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 PGAM4Q8N0Y7 254 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 TRIML2Q8N7C3 387 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 OR9A2Q8NGT5 310 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 FBXO27Q8NI29 283 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 CT55Q8WUE5 264 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 STMN2Q93045 179 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 RBM18Q96H35 190 aaKnown RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 CRELD1Q96HD1 420 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 DGAT2Q96PD7 388 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 CGREF1Q99674 301 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 GPATCH1Q9BRR8 931 aaKnown RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 TRIM4Q9C037 500 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 SOX17Q9H6I2 414 aaPredicted RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 CXorf36Q9H7Y0 433 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 IL1RL2Q9HB29 575 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
SPG7-209ENST00000564047 PADI2Q9Y2J8 665 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 PCDHB14Q9Y5E9 798 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 SPTBP11277 2137 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 C21orf140B9A014 251 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 PLOD2O00469 737 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 ALOX12BO75342 701 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 FKBP6O75344 327 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ENTPD5O75356 428 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 KLF7O75840 302 aaPredicted RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 PSMG1O95456 288 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 GSNP06396 782 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ABCB1P08183 1280 aaPredicted RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 TCN2P20062 427 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 NT5EP21589 574 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 UQCRC2P22695 453 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 PSME3P61289 254 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 SLC25A3Q00325 362 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 LTB4RQ15722 352 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 NSDHLQ15738 373 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 RUNDC3AQ59EK9 446 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ZNF628Q5EBL2 1059 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 DNAJC14Q6Y2X3 702 aaPredicted RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 SHISA6Q6ZSJ9 500 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 MSRB3Q8IXL7 192 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 LSM14AQ8ND56 463 aaKnown RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 METTL21AQ8WXB1 218 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 TSLPQ969D9 159 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 NXPE2Q96DL1 559 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 ELP4Q96EB1 424 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 RSRC1Q96IZ7 334 aaKnown RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 SH3GL1Q99961 368 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 CRB3Q9BUF7 120 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 THSD1Q9NS62 852 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 SLC6A13Q9NSD5 602 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 VAPAQ9P0L0 249 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 STX18Q9P2W9 335 aaKnown RBP12.07□□□□□ -0.48
SPG7-209ENST00000564047 C3orf18Q9UK00 162 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 GMEB1Q9Y692 573 aa12.07□□□□□ -0.48
SPG7-209ENST00000564047 COL6A6A6NMZ7 2263 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 A0A087WV62 115 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 MYOCOSA0A1B0GUC4 107 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 TRABD2BA6NFA1 517 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 PCDH17O14917 1159 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 IGHEP01854 428 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 IFNA16P05015 189 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 PPIBP23284 216 aaKnown RBP12.06□□□□□ -0.48
SPG7-209ENST00000564047 SLC6A2P23975 617 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 SOAT1P35610 550 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 FOLR3P41439 243 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 STAT5AP42229 794 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 ACTR3P61158 418 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 RPS15P62841 145 aaKnown RBP12.06□□□□□ -0.48
SPG7-209ENST00000564047 SLC34A1Q06495 639 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 MGAT2Q10469 447 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 MAP4K2Q12851 820 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 GAB1Q13480 694 aa12.06□□□□□ -0.48
SPG7-209ENST00000564047 CAPRIN1Q14444 709 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms