RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C6orf203Q9P0P8 240 aaPredicted RBP14.61□□□□□ -0.07
RNF40-205ENST00000563909 MYOTQ9UBF9 498 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 EMCNQ9ULC0 261 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 ANGPTL3Q9Y5C1 460 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 A8MT66 165 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 DLX3O60479 287 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 H2AFYO75367 372 aaKnown RBP14.6□□□□□ -0.07
RNF40-205ENST00000563909 P04436 131 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 TP53P04637 393 aaPredicted RBP14.6□□□□□ -0.07
RNF40-205ENST00000563909 MYL2P10916 166 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 EPB42P16452 691 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 CTSSP25774 331 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 OPRM1P35372 400 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 TNK1Q13470 666 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 PWP1Q13610 501 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 KRTAP24-1Q3LI83 254 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 NIPAL1Q6NVV3 410 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 NXPE4Q6UWF7 544 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 ZYG11AQ6WRX3 759 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 ABHD13Q7L211 337 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 TBC1D19Q8N5T2 526 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 TEX9Q8N6V9 391 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 GOLGA6L1Q8N7Z2 621 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 TCP10LQ8TDR4 215 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 ZBTB9Q96C00 473 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 HSPBAP1Q96EW2 488 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 RBM24Q9BX46 236 aaKnown RBP14.6□□□□□ -0.07
RNF40-205ENST00000563909 SLC6A15Q9H2J7 730 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 RHBGQ9H310 441 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 ACBD3Q9H3P7 528 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 PNO1Q9NRX1 252 aaKnown RBP14.6□□□□□ -0.07
RNF40-205ENST00000563909 KIAA1549Q9HCM3 1950 aa14.6□□□□□ -0.07
RNF40-205ENST00000563909 OR1F1O43749 312 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 TYROBPO43914 113 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 SIX3O95343 332 aaPredicted RBP14.59□□□□□ -0.07
RNF40-205ENST00000563909 SERPIND1P05546 499 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 RFPL3SP0C7P2 107 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 C1GALT1C1LP0DN25 315 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 CPA3P15088 417 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 CREB1P16220 341 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 TRPC1P48995 793 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 GPR143P51810 404 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 PRKAA2P54646 552 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 NR1H2P55055 460 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 RUNX1T1Q06455 604 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 TERF2Q15554 542 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 CHRFAM7AQ494W8 412 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 AGBL2Q5U5Z8 902 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 TMPRSS11BQ86T26 416 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 LIX1Q8N485 282 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 OR4K1Q8NGD4 311 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 NEIL3Q8TAT5 605 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 AIF1LQ9BQI0 150 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 C1QTNF3Q9BXJ4 246 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 EHD1Q9H4M9 534 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 YAE1D1Q9NRH1 226 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 GALNT8Q9NY28 637 aa14.59□□□□□ -0.07
RNF40-205ENST00000563909 PPIEQ9UNP9 301 aaKnown RBP14.59□□□□□ -0.07
RNF40-205ENST00000563909 G3V2L1 256 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 PSMD12O00232 456 aaPredicted RBP14.58□□□□□ -0.08
RNF40-205ENST00000563909 ZNF888P0CJ79 500 aaPredicted RBP14.58□□□□□ -0.08
RNF40-205ENST00000563909 CCL3P10147 92 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 IMPDH1P20839 514 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 HERVK_113P63132 956 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 IRF8Q02556 426 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 PCDH1Q08174 1060 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 LAPTM5Q13571 262 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 GTF2H2Q13888 395 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 CAPRIN1Q14444 709 aaKnown RBP14.58□□□□□ -0.08
RNF40-205ENST00000563909 GTF2H2CQ6P1K8 395 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 C20orf204Q6ZNR8 217 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 SLCO4C1Q6ZQN7 724 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 GOLM1Q8NBJ4 401 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 SGCZQ96LD1 299 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 FAM111AQ96PZ2 611 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 ERVK-6Q9BXR3 956 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 PITHD1Q9GZP4 211 aaPredicted RBP14.58□□□□□ -0.08
RNF40-205ENST00000563909 C12orf65Q9H3J6 166 aaKnown RBP14.58□□□□□ -0.08
RNF40-205ENST00000563909 KCNK9Q9NPC2 374 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 SLC17A7Q9P2U7 560 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 NDRG3Q9UGV2 375 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 ATG4BQ9Y4P1 393 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 EML6Q6ZMW3 1958 aa14.58□□□□□ -0.08
RNF40-205ENST00000563909 C15orf38-AP3S2A0A0A6YYH1 394 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 TRBC2A0A5B9 178 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 LRRC14BA6NHZ5 514 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 RNF223E7ERA6 249 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 TM9SF1O15321 606 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 TLX2O43763 284 aaPredicted RBP14.57□□□□□ -0.08
RNF40-205ENST00000563909 RPS17P08708 135 aaKnown RBP14.57□□□□□ -0.08
RNF40-205ENST00000563909 PPP2R1BP30154 601 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 PIGAP37287 484 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 CASP2P42575 452 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 CPA2P48052 419 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 DNAJB13P59910 316 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 MAGOHP61326 146 aaKnown RBP14.57□□□□□ -0.08
RNF40-205ENST00000563909 NAA20P61599 178 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 RGS1Q08116 209 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 ASPHQ12797 758 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 CHIT1Q13231 466 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms