RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SLC35F3Q8IY50 421 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 FNDC5Q8NAU1 212 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 MFSD9Q8NBP5 474 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 CAMKVQ8NCB2 501 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 HUS1BQ8NHY5 278 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 WDR20Q8TBZ3 569 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 SLC13A3Q8WWT9 602 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 RERGQ96A58 199 aaPredicted RBP4.38□□□□□ -1.71
CDR2-203ENST00000563573 RGMAQ96B86 450 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 CMTM5Q96DZ9 223 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 NSL1Q96IY1 281 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 QRFPRQ96P65 431 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 TGM7Q96PF1 710 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 OR2A14Q96R47 310 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 OR52B2Q96RD2 323 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 MTERF1Q99551 399 aaKnown RBP4.38□□□□□ -1.71
CDR2-203ENST00000563573 TIMP4Q99727 224 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 EBF4Q9BQW3 602 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 SARGQ9BW04 601 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 ABCG4Q9H172 646 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 LRTM1Q9HBL6 345 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 PDE7BQ9NP56 450 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 TMEM9BQ9NQ34 198 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 SAR1AQ9NR31 198 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 FARSBQ9NSD9 589 aaKnown RBP4.38□□□□□ -1.71
CDR2-203ENST00000563573 C1orf109Q9NX04 203 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 SPHK1Q9NYA1 384 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 EPHA6Q9UF33 1036 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 G3BP2Q9UN86 482 aaKnown RBP4.38□□□□□ -1.71
CDR2-203ENST00000563573 SLC12A4Q9UP95 1085 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 RUVBL1Q9Y265 456 aaKnown RBP4.38□□□□□ -1.71
CDR2-203ENST00000563573 BTRCQ9Y297 605 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 PCDH15Q96QU1 1955 aa4.38□□□□□ -1.71
CDR2-203ENST00000563573 KNL1Q8NG31 2342 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 A0A088AWK7 358 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 A0A1W2PS29 197 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ARHGAP10A1A4S6 786 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TLCD2A6NGC4 264 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 SLC9B1P1A6NJY1 282 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 MAGEB17A8MXT2 336 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 E9PBE3 544 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 PSMD12O00232 456 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 TRIM38O00635 465 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 FCHO1O14526 889 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 HAT1O14929 419 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 LSM1O15116 133 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 SLC22A2O15244 555 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TOX3O15405 576 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 MPPED1O15442 326 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ZSCAN9O15535 394 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 B4GAT1O43505 415 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 AKAP10O43572 662 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 KLHL41O60662 606 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 GUCY1B2O75343 617 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 RSL1D1O76021 490 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 ZBTB11O95625 1053 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 CPNE6O95741 557 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 SLC35G6P0C7Q6 338 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 GIMD1P0DJR0 217 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 THRAP10827 490 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 IDO1P14902 403 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 CKMT2P17540 419 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 DDX5P17844 614 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 WT1P19544 449 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 MAGP20916 626 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 CD1CP29017 333 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 PEBP1P30086 187 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 NBL1P41271 181 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TSFMP43897 325 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 ASMTP46597 345 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 CAPZBP47756 277 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 SLC6A9P48067 706 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 HTR6P50406 440 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ATP4BP51164 291 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ARFIP1P53367 373 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 RPS7P62081 194 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 SKP1P63208 163 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 REEP5Q00765 189 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 HMGCS1Q01581 520 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 RGS1Q08116 209 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ACSM2AQ08AH3 577 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TCF15Q12870 199 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 STX5Q13190 355 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 PIN1Q13526 163 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 SQLEQ14534 574 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 NR1D2Q14995 579 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 KRT72Q14CN4 511 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 ZSCAN26Q16670 478 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 MMEL1Q495T6 779 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 AASDHQ4L235 1098 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 TMEM35AQ53FP2 167 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TCTE1Q5JU00 501 aa4.37□□□□□ -1.71
CDR2-203ENST00000563573 TCHHL1Q5QJ38 904 aaPredicted RBP4.37□□□□□ -1.71
CDR2-203ENST00000563573 DEPDC1Q5TB30 811 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms