RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ADAMTSL5Q6ZMM2 481 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ASPGQ86U10 573 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 SIX6OS1Q8N1H7 587 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 RNF175Q8N4F7 328 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 CCDC26Q8TAB7 109 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 MR1Q95460 341 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 FAM162AQ96A26 154 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 CDKN2AIPNLQ96HQ2 116 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 AP1M1Q9BXS5 423 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 TRIM9Q9C026 710 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZDHHC6Q9H6R6 413 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZNF702PQ9H963 129 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ATG4BQ9Y4P1 393 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 FGD5Q6ZNL6 1462 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZNFX1Q9P2E3 1918 aaKnown RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 MFSD2BA6NFX1 497 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 G3V3Y1 287 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 GLCEO94923 617 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 OAS1P00973 400 aaKnown RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 CENPBP07199 599 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 WNT2P09544 360 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 ALPIP09923 528 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 NUDT17P0C025 328 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 CT45A10P0DMU9 189 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 MBL2P11226 248 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 IFNAR1P17181 557 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 PSMB1P20618 241 aaKnown RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 CASTP20810 708 aaKnown RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 ACP1P24666 158 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 PTPN4P29074 926 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 TRIM23P36406 574 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 FRKP42685 505 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 NT5C2P49902 561 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 TNFSF10P50591 281 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZNF33BQ06732 778 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 PTK6Q13882 451 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 PAGE2BQ5JRK9 111 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 SHQ1Q6PI26 577 aaKnown RBP2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 PET117Q6UWS5 81 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 MKXQ8IYA7 352 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 SERINC2Q96SA4 455 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 C19orf43Q9BQ61 176 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 TUFT1Q9NNX1 390 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 DPM3Q9P2X0 92 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 NEU3Q9UQ49 428 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 RNF115Q9Y4L5 304 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 AFF2P51816 1311 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 ARHGAP23Q9P227 1491 aa2.05□□□□□ -2.08
HMGB1P33-201ENST00000563485 A0A0A6YYD4 124 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 SDR42E2A6NKP2 422 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 WDR46O15213 610 aaKnown RBP2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 TIMM44O43615 452 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GH1P01241 217 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 FCER2P06734 321 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 C8orf89P0DMQ9 161 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 CT45A8P0DMV1 189 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 CT45A9P0DMV2 189 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 B4GALT1P15291 398 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 DIO3P55073 304 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 RPS8P62241 208 aaKnown RBP2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GTF3C1Q12789 2109 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 CT45A2Q5DJT8 189 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 DDI2Q5TDH0 399 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 DCLRE1AQ6PJP8 1040 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 MFSD7Q6UXD7 560 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GPR142Q7Z601 462 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GLRX5Q86SX6 157 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 LUZP1Q86V48 1076 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 OR4L1Q8NH43 312 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 TFB1MQ8WVM0 346 aaKnown RBP2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 CXorf58Q96LI9 332 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 C9orf85Q96MD7 179 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GUCD1Q96NT3 240 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 FAM173AQ9BQD7 235 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 C19orf24Q9BVV8 132 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GPR174Q9BXC1 333 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 TMEM161AQ9NX61 479 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 VPS18Q9P253 973 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 GIMAP2Q9UG22 337 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 MRTO4Q9UKD2 239 aaKnown RBP2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 EMCNQ9ULC0 261 aa2.04□□□□□ -2.08
HMGB1P33-201ENST00000563485 IGKV6-21A0A0C4DH24 114 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 OOEPA6NGQ2 149 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 TCP11X1B4DZS4 312 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC17A2O00624 439 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC16A8O95907 504 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 CHRNGP07510 517 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 CCDC166P0CW27 439 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZP3P21754 424 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 IGFBP5P24593 272 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 RPA1P27694 616 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 OR3A4PP47883 348 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 OR1D4P47884 311 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 KCNK10P57789 538 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 KRTAP10-10P60014 251 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 MSLNQ13421 630 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 GIT2Q14161 759 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 NFE2L1Q14494 772 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 IL17AQ16552 155 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 STOX1Q6ZVD7 989 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms