RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 BZW2Q9Y6E2 419 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 OTOFQ9HC10 1997 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TRGV11A0A075B6L2 103 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 A0A096LPK6 155 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SMIM35A0A1B0GVV1 85 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 EEF2KO00418 725 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 EIF3HO15372 352 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ZW10O43264 779 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LCMT2O60294 686 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 JAK2O60674 1132 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LDB3O75112 727 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MFAP3LO75121 409 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LYPLA2O95372 231 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PIGNO95427 931 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ECDO95905 644 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PGK1P00558 417 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 EGFP01133 1207 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 KRT6AP02538 564 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CPN1P15169 458 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CYP11B1P15538 503 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 RPL13P26373 211 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 YWHABP31946 246 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MAGEA11P43364 429 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 NKX2-1P43699 371 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SOX2P48431 317 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 RGS19P49795 217 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CCT8P50990 548 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 BLVRAP53004 296 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CD81P60033 236 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SNRPFP62306 86 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 GUCY1B3Q02153 619 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CSTF1Q05048 431 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 HYAL1Q12794 435 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ASPHQ12797 758 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MERTKQ12866 999 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 DMP1Q13316 513 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CDH18Q13634 790 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 NCF4Q15080 339 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TGFBIQ15582 683 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MIIPQ5JXC2 388 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PLCXD3Q63HM9 321 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LCN10Q6JVE6 187 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SLC25A25Q6KCM7 469 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 KCTD8Q6ZWB6 473 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 VTCN1Q7Z7D3 282 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TMEM123Q8N131 208 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 METTL13Q8N6R0 699 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 BMPERQ8N8U9 685 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PAPD5Q8NDF8 572 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CPEB3Q8NE35 698 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TRPV3Q8NET8 790 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CD300LFQ8TDQ1 290 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SSMEM1Q8WWF3 244 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PIGCQ92535 297 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SEPT8Q92599 483 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TOP1MTQ969P6 601 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MBOAT7Q96N66 472 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TECTBQ96PL2 329 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CYTH2Q99418 400 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SLA2Q9H6Q3 261 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CTSFQ9UBX1 484 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ADAM21Q9UKJ8 722 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 WNT6Q9Y6F9 365 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SIPA1L1O43166 1804 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF236Q9UL36 1845 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 PTPRFP10586 1907 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 FNDC1Q4ZHG4 1894 aaPredicted RBP4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 WWP2O00308 870 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 LSM1O15116 133 aaKnown RBP4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 MSH4O15457 936 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CHMP2AO43633 222 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 KRT36O76013 467 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ERLIN2O94905 339 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CTDNEP1O95476 244 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CLPTM1O96005 669 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 LGALS2P05162 132 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 KRT19P08727 400 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 PRKAR1AP10644 381 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ITGAMP11215 1152 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CYP3A5P20815 502 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 NAMPTP43490 491 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 TPMTP51580 245 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CLDN15P56746 228 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CSNK2A1P68400 391 aaPredicted RBP4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ZXDBP98169 803 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 SP4Q02446 784 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 IRF8Q02556 426 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 PMPCAQ10713 525 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ILKQ13418 452 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 GPR176Q14439 515 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 TMEM44Q2T9K0 475 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 AMZ1Q400G9 498 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 SYT14P1Q58G82 188 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 GGNBP1Q5YKI7 109 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 ARMC6Q6NXE6 501 aa4.81□□□□□ -1.64
VPS35P1-201ENST00000563400 CXCL17Q6UXB2 119 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms