RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ATP1B1P05026 303 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 MSL3P1P0C860 447 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 CKMT1AP12532 417 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 GCGRP47871 477 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 KCNJ10P78508 379 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 SYPL1Q16563 259 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 FAM214AQ32MH5 1076 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 TTLL10Q6ZVT0 673 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 SLC30A8Q8IWU4 369 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 OR2L13Q8N349 312 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 CBR4Q8N4T8 237 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 NAT6Q93015 286 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 DOHHQ9BU89 302 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 EQTNQ9NQ60 294 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 DNAJB9Q9UBS3 223 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 RAB23Q9ULC3 237 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 KCNE3Q9Y6H6 103 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 MAU2Q9Y6X3 613 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 R4GN57 208 aa16.92■□□□□ 0.3
COMMD4-208ENST00000563220 FAM86C2PA6NEL3 165 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 OR2W5A6NFC9 320 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 H0YIG0 161 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 TGFBR3LH3BV60 316 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF749O43361 778 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 CDC123O75794 336 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 PGM3O95394 542 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 MAN2A2P49641 1150 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 KHKP50053 298 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 CLCN2P51788 898 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 VLDLRP98155 873 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 IQCCQ4KMZ1 466 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 TBPL2Q6SJ96 375 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 ARHGAP22Q7Z5H3 698 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 OR51Q1Q8NH59 317 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 IFI44Q8TCB0 444 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 TMBIM1Q969X1 311 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF501Q96CX3 271 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 RSPO3Q9BXY4 272 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 CLK4Q9HAZ1 481 aaKnown RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 DDX18Q9NVP1 670 aaKnown RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 THUMPD1Q9NXG2 353 aaKnown RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 DHCR7Q9UBM7 475 aaKnown RBP16.91■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF639Q9UID6 485 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 ABCG2Q9UNQ0 655 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 FRYLO94915 3013 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 SPEGQ15772 3267 aa16.91■□□□□ 0.3
COMMD4-208ENST00000563220 C5orf58C9J3I9 102 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 HOXB6P17509 224 aaKnown RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 NT5EP21589 574 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ALAS2P22557 587 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 MAGEA8P43361 318 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 IST1P53990 364 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 BTG2P78543 158 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 DAB2P98082 770 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 MGAT2Q10469 447 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ELOAQ14241 798 aaKnown RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 FHL5Q5TD97 284 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ZC3H14Q6PJT7 736 aaKnown RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 DGAT2L6Q6ZPD8 337 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 PRR23CQ6ZRP0 262 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 OLIG3Q7RTU3 272 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 RCBTB1Q8NDN9 531 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 OR4D9Q8NGE8 314 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 LOXL4Q96JB6 756 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 C7orf34Q96L11 122 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 BTBD9Q96Q07 612 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 OR7D2Q96RA2 312 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 C9orf16Q9BUW7 83 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 FGF21Q9NSA1 209 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 P2RX2Q9UBL9 471 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 CLDN16Q9Y5I7 305 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SCN2AQ99250 2005 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 IGHV5-10-1A0A0J9YXX1 117 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 EIF4E1BA6NMX2 242 aaKnown RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 hCG_2039718K7EN88 272 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 HYAL3O43820 417 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SLC28A2O43868 658 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 CTNSO60931 367 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 LYNP07948 512 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 CT62P0C5K7 136 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 UQCRBP14927 111 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 OR1D4P47884 311 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ITGA1P56199 1179 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 FUT5Q11128 374 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 PRICKLE4Q2TBC4 344 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 WDR53Q7Z5U6 358 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 PATL1Q86TB9 770 aaKnown RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SMYD1Q8NB12 490 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF597Q96LX8 424 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SYNDIG1Q9H7V2 258 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 MAT2BQ9NZL9 334 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 PTGFRNQ9P2B2 879 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 SERTAD3Q9UJW9 196 aa16.9■□□□□ 0.3
COMMD4-208ENST00000563220 C19orf53Q9UNZ5 99 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 MAGED1Q9Y5V3 778 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-208ENST00000563220 PRAMEF25A6NGN4 478 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 AGRPO00253 132 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms