RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SLC25A25Q6KCM7 469 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 NOXRED1Q6NXP6 359 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 SLC29A4Q7RTT9 530 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 C9orf40Q8IXQ3 194 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 OR2T11Q8NH01 316 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 TMEM125Q96AQ2 219 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 TLCD1Q96CP7 247 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 ZNF681Q96N22 645 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 TAAR6Q96RI8 345 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 RASL10BQ96S79 203 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 CCT7Q99832 543 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 LIN28AQ9H9Z2 209 aaKnown RBP15.34■□□□□ 0.05
CDT1-202ENST00000562747 MYNNQ9NPC7 610 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 OLAHQ9NV23 265 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 ZDHHC2Q9UIJ5 367 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 TMED5Q9Y3A6 229 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 POLR3HQ9Y535 204 aaPredicted RBP15.34■□□□□ 0.05
CDT1-202ENST00000562747 PTGDR2Q9Y5Y4 395 aa15.34■□□□□ 0.05
CDT1-202ENST00000562747 WWP2O00308 870 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 PIP5K1BO14986 540 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 SLC25A12O75746 678 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 HSPA4LO95757 839 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 CRYABP02511 175 aaKnown RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 LINC00032P0C843 101 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 DDCP20711 480 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 GRK2P25098 689 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 FEN1P39748 380 aaKnown RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 MAP4K2Q12851 820 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 PRICKLE4Q2TBC4 344 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 C16orf47Q6ZP98 133 aaPredicted RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 IKBIPQ70UQ0 350 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 ZNF227Q86WZ6 799 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 DDIASQ8IXT1 998 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 CYP4Z2PQ8N1L4 340 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 LRRC25Q8N386 305 aaPredicted RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 OR7G1Q8NGA0 311 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 DNAJB8Q8NHS0 232 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDT1-202ENST00000562747 AGR3Q8TD06 166 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 ASB15Q8WXK1 588 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 CNRIP1Q96F85 164 aaPredicted RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 FCRL1Q96LA6 429 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 KLHL1Q9NR64 748 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 GIMAP4Q9NUV9 329 aa15.33■□□□□ 0.04
CDT1-202ENST00000562747 ARGLU1Q9NWB6 273 aaPredicted RBP15.33■□□□□ 0.04
CDT1-202ENST00000562747 AKAP9Q99996 3911 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 TMEM120BA0PK00 339 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 A8MVJ9 347 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 LSM1O15116 133 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 NME2P1O60361 137 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 CLPSP04118 112 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 CT62P0C5K7 136 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 NME2P22392 152 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 ABCE1P61221 599 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 MAGOHP61326 146 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 SRSF11Q05519 484 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 C2orf80Q0P641 193 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 EBPQ15125 230 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 CEBPEQ15744 281 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 XKR7Q5GH72 579 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 PIGGQ5H8A4 983 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 HHATQ5VTY9 493 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 FAM71E1Q6IPT2 247 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 OPN5Q6U736 354 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 GALNTL5Q7Z4T8 443 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 KIRREL3Q8IZU9 778 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 VWA5B2Q8N398 1253 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 SLC15A4Q8N697 577 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 FAM98AQ8NCA5 519 aaKnown RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 SLC22A8Q8TCC7 542 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 DOK4Q8TEW6 326 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 ITLN2Q8WWU7 325 aaPredicted RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 PPP3R2Q96LZ3 170 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 HES7Q9BYE0 225 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 WWTR1Q9GZV5 400 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 OR10A5Q9H207 317 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 PFDN4Q9NQP4 134 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 SLC35C2Q9NQQ7 365 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 HPF1Q9NWY4 346 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 MAT2BQ9NZL9 334 aa15.32■□□□□ 0.04
CDT1-202ENST00000562747 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.32■□□□□ 0.04
CDT1-202ENST00000562747 A0A1B0GUH1 482 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 ASPDHA6ND91 283 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 ITM2AO43736 263 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 BGNP21810 368 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 SSTR4P31391 388 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 SOX3P41225 446 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 RPL38P63173 70 aaKnown RBP15.31■□□□□ 0.04
CDT1-202ENST00000562747 DUSP2Q05923 314 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 MGAT2Q10469 447 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 MAPKAPK3Q16644 382 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 RFTN2Q52LD8 501 aaPredicted RBP15.31■□□□□ 0.04
CDT1-202ENST00000562747 AGBL2Q5U5Z8 902 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 CES4AQ5XG92 561 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 ZNF615Q8N8J6 731 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 CDC26Q8NHZ8 85 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 ZNF675Q8TD23 568 aa15.31■□□□□ 0.04
CDT1-202ENST00000562747 NR4A3Q92570 626 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms