RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 LGI4Q8N135 537 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 OR9Q2Q8NGE9 314 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 HGDQ93099 445 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 GTPBP3Q969Y2 492 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 SCMH1Q96GD3 660 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 ADGRE3Q9BY15 652 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 ABCG8Q9H221 673 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 OR51J1Q9H342 316 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 SPATA2Q9UM82 520 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 CCL26Q9Y258 94 aa13.32□□□□□ -0.28
GTF3C1-203ENST00000562609 C7orf66A4D0T2 115 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 POM121CA8CG34 1229 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 A8MXK9 166 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 RGS11O94810 467 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 APOC3P02656 99 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ANXA8P13928 327 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CD70P32970 193 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 STK19P49842 368 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ATP12AP54707 1039 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 COX10Q12887 443 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 MAD2L1Q13257 205 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CDKL4Q5MAI5 379 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 NCEH1Q6PIU2 408 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 FTMTQ8N4E7 242 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ZNF784Q8NCA9 323 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 DNAJB8Q8NHS0 232 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 SPPL2AQ8TCT8 520 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 MND1Q9BWT6 205 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 GPR63Q9BZJ6 419 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 OR51B4Q9Y5P0 310 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ABHD14A-ACY1A0A1B0GW23 586 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CCL16O15467 120 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 LRRTM2O43300 516 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 SH3BP5O60239 455 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 TNFRSF1BP20333 461 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CTSOP43234 321 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 EVX1P49640 407 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 MEOX2P50222 304 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CDH12P55289 794 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 KCNJ10P78508 379 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 PLA1AQ53H76 456 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 LRRC73Q5JTD7 316 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 RGS7BPQ6MZT1 257 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 FAM151BQ6UXP7 276 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CMTM8Q8IZV2 173 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 MTFMTQ96DP5 389 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 C1GALT1C1Q96EU7 318 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ALG14Q96F25 216 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ZNF436Q9C0F3 470 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 IPPKQ9H8X2 491 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 FBXL2Q9UKC9 423 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ABCD4O14678 606 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 BCKDHAP12694 445 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ENGP17813 658 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 LAG3P18627 525 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 OGNP20774 298 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CNR2P34972 360 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 TRIM23P36406 574 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ABRQ12979 859 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 FAM74A3Q4VXF1 159 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CD276Q5ZPR3 534 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 AFTPHQ6ULP2 937 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CLDN19Q8N6F1 224 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 HJURPQ8NCD3 748 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 EEF1AKMT1Q8WVE0 214 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 PIH1D2Q8WWB5 315 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ERMAPQ96PL5 475 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 LRTM1Q9HBL6 345 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 ACTR10Q9NZ32 417 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 HCN2Q9UL51 889 aa13.31□□□□□ -0.28
GTF3C1-203ENST00000562609 CLIC1O00299 241 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 PDCD5O14737 125 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 LPLP06858 475 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 C8AP07357 584 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 RHCEP18577 417 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 CCR2P41597 374 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 SPIBQ01892 262 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 MLLT11Q13015 90 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 EXOC3L2Q2M3D2 409 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 CTSL3PQ5NE16 218 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 PTOV1Q86YD1 416 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 TM9SF4Q92544 642 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms