RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FAM107BQ9H098 131 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 ZNF552Q9H707 407 aaPredicted RBP9.97□□□□□ -0.81
TPM1-229ENST00000561242 Q9N2J8 555 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 SLCO1B3Q9NPD5 702 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 ASIC5Q9NY37 505 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 MYOTQ9UBF9 498 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 HEY2Q9UBP5 337 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 ATP6V1HQ9UI12 483 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 KLF13Q9Y2Y9 288 aaPredicted RBP9.97□□□□□ -0.81
TPM1-229ENST00000561242 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
TPM1-229ENST00000561242 PCM1Q15154 2024 aa9.96□□□□□ -0.81
TPM1-229ENST00000561242 PRSS51A0A1B0GVH4 220 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 CCDC154A6NI56 674 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 DUXAA6NLW8 204 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 E9PBE3 544 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ACOT7O00154 380 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ACOX3O15254 700 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 TBX19O60806 448 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 CCDC22O60826 627 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 EDF1O60869 148 aaKnown RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 REM1O75628 298 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 CEACAM4O75871 244 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 OR2J2O76002 312 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 RASAL1O95294 804 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 AGR2O95994 175 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ALOX5P09917 674 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 IDH3AP50213 366 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 MLF1P58340 268 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 SNRPNP63162 240 aaKnown RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 GNGT1P63211 74 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ZNF169Q14929 603 aaPredicted RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 MAPRE2Q15555 327 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 OR1C1Q15619 314 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 DECR1Q16698 335 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 MMEL1Q495T6 779 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 C6orf10Q5SRN2 563 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 METTL21CQ5VZV1 264 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 B3GNTL1Q67FW5 361 aaPredicted RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 OGFOD2Q6N063 350 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ANKRD26P1Q6NSI1 321 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 PAOXQ6QHF9 649 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 TMEM107Q6UX40 140 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 IL20RBQ6UXL0 311 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ATG14Q6ZNE5 492 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ZNF621Q6ZSS3 439 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 LARP4Q71RC2 724 aaKnown RBP eCLIP9.96□□□□□ -0.82
TPM1-229ENST00000561242 CYP4Z2PQ8N1L4 340 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 BEST3Q8N1M1 668 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 NUP43Q8NFH3 380 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 OR7A2PQ8NGA2 310 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 OR56A1Q8NGH5 318 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ADAMTS15Q8TE58 950 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 SLC9A6Q92581 669 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 HSPBAP1Q96EW2 488 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ITCHQ96J02 903 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 LCORQ96JN0 433 aaPredicted RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 EGLN2Q96KS0 407 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 PANX1Q96RD7 426 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 SDHAF3Q9NRP4 125 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ZCCHC3Q9NUD5 404 aaKnown RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 EXD2Q9NVH0 621 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 FAM120CQ9NX05 1096 aaKnown RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 PLA2G3Q9NZ20 509 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 ZIM2Q9NZV7 527 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 GIMAP2Q9UG22 337 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 CES1P1Q9UKY3 287 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 VPS4AQ9UN37 437 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 CCL27Q9Y4X3 112 aa9.96□□□□□ -0.82
TPM1-229ENST00000561242 COPG1Q9Y678 874 aaKnown RBP9.96□□□□□ -0.82
TPM1-229ENST00000561242 A0A087WV62 115 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 GMNCA6NCL1 334 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 WASHC1A8K0Z3 465 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 MYO1GB0I1T2 1018 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 MASP2O00187 686 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SDHDO14521 159 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ABCB7O75027 752 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 KRT75O95678 551 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 WDPCPO95876 746 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 TACR1P25103 407 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SSTR4P31391 388 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 RFX3P48380 749 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 MASP1P48740 699 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 CCT3P49368 545 aaKnown RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 HLCSP50747 726 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 POLR2JP52435 117 aaKnown RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 HPCAP84074 193 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 RBPJQ06330 500 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 PLCXD2Q0VAA5 305 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 EFR3AQ14156 821 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SQLEQ14534 574 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 PTGR1Q14914 329 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 MPEG1Q2M385 716 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 PRICKLE4Q2TBC4 344 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF750Q32MQ0 723 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SLC9B1Q4ZJI4 515 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 PDCD4Q53EL6 469 aaKnown RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF766Q5HY98 468 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SLC22A10Q63ZE4 541 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 TMEM198Q66K66 360 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SLC25A25Q6KCM7 469 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms