RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	EFNA3	P52797	238 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	PGGT1B	P53609	377 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MPP1	Q00013	466 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MAT1A	Q00266	395 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	EEF1A2	Q05639	463 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	CDC16	Q13042	620 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	THOC5	Q13769	683 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	KRTAP15-1	Q3LI76	137 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	TUBB8	Q3ZCM7	444 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	AGAP7P	Q5VUJ5	663 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	CYHR1	Q6ZMK1	362 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	PIWIL4	Q7Z3Z4	852 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	PAQR7	Q86WK9	346 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	LURAP1L	Q8IV03	231 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	CPNE9	Q8IYJ1	553 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	RAB42	Q8N4Z0	105 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	SIRT6	Q8N6T7	355 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	CSNK1A1L	Q8N752	337 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	ABHD11	Q8NFV4	315 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	TRIM58	Q8NG06	486 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	SUN3	Q8TAQ9	357 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MAGEC3	Q8TD91	643 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	UBE2Q2	Q8WVN8	375 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	TM9SF4	Q92544	642 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MMAB	Q96EY8	250 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	AGAP4	Q96P64	663 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	GPR21	Q99679	349 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	TIMP4	Q99727	224 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	WDR77	Q9BQA1	342 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	LHPP	Q9H008	270 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MRPS30	Q9NP92	439 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	NECTIN3	Q9NQS3	549 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	C20orf96	Q9NUD7	363 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	SPATA7	Q9P0W8	599 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	NKX1-2	Q9UD57	310 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	ZNF282	Q9UDV7	671 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	STEAP1	Q9UHE8	339 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	PCYOX1	Q9UHG3	505 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	PPP2R2C	Q9Y2T4	447 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	MAD1L1	Q9Y6D9	718 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	COMMD10	Q9Y6G5	202 aa		6.64	□□□□□ -1.35
MARK3-223	ENST00000561071	FAM237B	A0A1B0GVD1	139 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	AQP12B	A6NM10	295 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	IDS	B3KWA1	339 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	AP3B1	O00203	1094 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	HAT1	O14929	419 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PFDN6	O15212	129 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	BANF1	O75531	89 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	LDLR	P01130	860 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	CAT	P04040	527 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	HEXB	P07686	556 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.63	□□□□□ -1.35	2e-6	■□□□□ 10.2
MARK3-223	ENST00000561071	COX6A1	P12074	109 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	CREB1	P16220	341 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	BMP5	P22003	454 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ATP5D	P30049	168 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	COIL	P38432	576 aa	Predicted RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	EMP2	P54851	167 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ADAR	P55265	1226 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	SUMO2	P61956	95 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	SARNP	P82979	210 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	CACNA1D	Q01668	2161 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PRDX1	Q06830	199 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PCM1	Q15154	2024 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	HSP90AA5P	Q58FG0	334 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	IRAK1BP1	Q5VVH5	260 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ATG9B	Q674R7	924 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ZNF425	Q6IV72	752 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PRMT9	Q6P2P2	845 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	CCDC137	Q6PK04	289 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	IGFL2	Q6UWQ7	119 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ISLR2	Q6UXK2	745 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	MBOAT1	Q6ZNC8	495 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PRSS41	Q7RTY9	318 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ADCK2	Q7Z695	626 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	KCNMB4	Q86W47	210 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	KRT73	Q86Y46	540 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	AMER3	Q8N944	861 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	ZNF527	Q8NB42	609 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	OR1N1	Q8NGS0	311 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	OR9A4	Q8NGU2	314 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	GRHL3	Q8TE85	626 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PSMF1	Q92530	271 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	CREBBP	Q92793	2442 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PRAP1	Q96NZ9	151 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	SERPINB12	Q96P63	405 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	OR2A5	Q96R48	311 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	NDN	Q99608	321 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	BARD1	Q99728	777 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	THAP7	Q9BT49	309 aa	Predicted RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	DIDO1	Q9BTC0	2240 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	FAM114A2	Q9NRY5	505 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	HOMER3	Q9NSC5	361 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	IARS2	Q9NSE4	1012 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	INTS10	Q9NVR2	710 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	PTGFRN	Q9P2B2	879 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	NXT1	Q9UKK6	140 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	FBXO5	Q9UKT4	447 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	OSGIN2	Q9Y236	505 aa		6.63	□□□□□ -1.35
MARK3-223	ENST00000561071	DHRS7	Q9Y394	339 aa		6.63	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms